Gene Svir_32090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32090 
Symbol 
ID8388533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3478226 
End bp3478687 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content65% 
IMG OID644977236 
Productribose 5-phosphate isomerase 
Protein accessionYP_003135009 
Protein GI257057177 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR02133] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.124709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.300701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCG TGGTGGCAGC GGACAACGCC GGTGTCGACC TGAAGAACCT CGTGCGTGAC 
CAATTGCGCG CCGACGAACG GGTGAGCGAG GTCATCGACC TGGGGGCCGC GAGTGTGGAC
GACGACACGG CCTACCCGCA CTTCGGTCTC GCCGCCGCCG AGAAGATCGC GAACGGTGAG
GCCGATCGCG GCATCCTCGT CTGTGGGACC GGGATCGGCA TGGCGATCTC GGCCAACAAG
GTGACCGGGA TCCGAGCTAC AGTCGCACAC GACTCCTACT CGGCGGAACG CTCGATCAAG
TCCAACAACT GCCAGATCAT CACCTTCGGC GCTCGGGTCA TCGGACCCGA ACTGGCGAAG
AAGATCACGC ACGAGTGGAT CGGCTACACC TTCGACCCCA CTTCGGCCAG CGCGGCCAAG
GTCGCACGCA TCACCGAGTA CGAAACCCAG GCCGCCTGCT GA
 
Protein sequence
MRVVVAADNA GVDLKNLVRD QLRADERVSE VIDLGAASVD DDTAYPHFGL AAAEKIANGE 
ADRGILVCGT GIGMAISANK VTGIRATVAH DSYSAERSIK SNNCQIITFG ARVIGPELAK
KITHEWIGYT FDPTSASAAK VARITEYETQ AAC