Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_32090 |
Symbol | |
ID | 8388533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3478226 |
End bp | 3478687 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644977236 |
Product | ribose 5-phosphate isomerase |
Protein accession | YP_003135009 |
Protein GI | 257057177 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR02133] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.124709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.300701 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTCG TGGTGGCAGC GGACAACGCC GGTGTCGACC TGAAGAACCT CGTGCGTGAC CAATTGCGCG CCGACGAACG GGTGAGCGAG GTCATCGACC TGGGGGCCGC GAGTGTGGAC GACGACACGG CCTACCCGCA CTTCGGTCTC GCCGCCGCCG AGAAGATCGC GAACGGTGAG GCCGATCGCG GCATCCTCGT CTGTGGGACC GGGATCGGCA TGGCGATCTC GGCCAACAAG GTGACCGGGA TCCGAGCTAC AGTCGCACAC GACTCCTACT CGGCGGAACG CTCGATCAAG TCCAACAACT GCCAGATCAT CACCTTCGGC GCTCGGGTCA TCGGACCCGA ACTGGCGAAG AAGATCACGC ACGAGTGGAT CGGCTACACC TTCGACCCCA CTTCGGCCAG CGCGGCCAAG GTCGCACGCA TCACCGAGTA CGAAACCCAG GCCGCCTGCT GA
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Protein sequence | MRVVVAADNA GVDLKNLVRD QLRADERVSE VIDLGAASVD DDTAYPHFGL AAAEKIANGE ADRGILVCGT GIGMAISANK VTGIRATVAH DSYSAERSIK SNNCQIITFG ARVIGPELAK KITHEWIGYT FDPTSASAAK VARITEYETQ AAC
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