Gene Svir_32040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32040 
Symbol 
ID8388528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3472627 
End bp3473097 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content67% 
IMG OID644977231 
Producthistidine kinase 
Protein accessionYP_003135004 
Protein GI257057172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.3856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.302354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGC GGGCGCACGT CCCGTACGCG ACCCCATTGG TGGATACGCG GCTCAGTGCG 
GACAAGAACA TGCCGGCGCG GTCCAGGCGG CTCACCGGCG ACGCGCTCGG CGAGATCGAG
CCCGACACCC GGTACAACTT CCTGCTGATG CTCTCGGAGC TGGTGGCCAA TGCCGTCCTG
CATTCGCGCA CCCCCGAACG GCTGCGCGTA CTACGGGTGG GCGACCGGCT CCGAGTCGAG
GTCTACGACG ACAGTTCGGA TTTCCCCGTG GTCATGACAC CGTCCCCACA CCGGGTGCAC
GGGCGGGGGA TGCTGCTCGT CGACGCGCTC GCCAGCGACT GGGGCGTCAA CAGCACACCG
AGCGGGAAGG TCGTATGGGC GGAAGTGCGG TTGTCCGCGG CCCCCTCGTG TCGGGAAGCC
CACGTCGATA TGTTCGAGAA GGATCAGGTC CGTGATCTCG GACGTACGTG A
 
Protein sequence
MAERAHVPYA TPLVDTRLSA DKNMPARSRR LTGDALGEIE PDTRYNFLLM LSELVANAVL 
HSRTPERLRV LRVGDRLRVE VYDDSSDFPV VMTPSPHRVH GRGMLLVDAL ASDWGVNSTP
SGKVVWAEVR LSAAPSCREA HVDMFEKDQV RDLGRT