Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_31840 |
Symbol | |
ID | 8388508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3453402 |
End bp | 3454607 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977211 |
Product | threonine dehydratase |
Protein accession | YP_003134984 |
Protein GI | 257057152 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.67382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACTTG TCAGCGTGGA CACAATCCGC GAGGCGAGGC GTCTGCTGGA GTCCGTCGTG CGGAAAACGC CGATGGAGCA TGCGCGGGAT CTCGAAGCCC CACACGGTGG CCCCGTGTAC CTCAAGTGCG AGAATCTGCA ACGCACAGGC TCGTTCAAGA TCAGAGGGGC GTACACCCGC ATACACGGGC TGACCGAGGA GGAACGCGCG CGGGGCGTGG TGGCCGCGAG CGCGGGAAAC CATGCCCAAG GTGTCGCGCT CGCCGCGTCC CTGCTGGGCG CCAACGCGAC GGTGTTCATG CCCGAACGGG CGCCTTTGCC GAAACTCGCC GCCACCCGCG GCTACGGAGC GGATGTCCAC CTGCACGGCG ATGTGTTGGA GGACGCGCTG GTCAAGGCGA CCGCGTTCGC CGAGCAGACC GGCGCGGTGT TCATCCACCC GTTCGACCAT CCCGACATCA TCGCCGGTCA GGGCACCGTG GGCCTGGAGA TCCTGGAGCA GGTGCCGGAC GTGGCCACGG TGGTGGTCGC CACCGGTGGT GGTGGTCTGG TGGGCGGCGT GGCCAGTGCC CTGAAGGCGG AGCGGCCCGA GATCCGGGTC GTGGGGGTGC AGGCCGAGGG TGCGGCGGCG TTCCCCCTGT CGCTGTCCGC GGGTAATCCG GTGCGACTCG ACCGGATGCA GACGATGGCC GACGGCATCG CCGTCGGCGA ACCGGGACCG ATCACCTTCG AACACGTGCG GTCACTCGTC GACGACGTGG TGACCGTGGG GGAGGAGTCG TTGTCCCGGG CCGTGCTGTT GTGTCTGGAA CGACGCAAGC TCGTCGTGGA GCCCGCGGGT GCGGCGGCGG TGGCCGCGCT GCTGGAGCAC CCCGGCGTGT TCGAACCGCC GATCGTCGCC GTGCTCTCGG GCGGCAATGT GGACCCGTTG CTGTTGTTGC AGATCATCCA GCACGGCATG ACGGCCGCCG GGCGTTATCT GAGCCTGCGG TTGCGGGTGC CGGACCGGCC CGGATCGCTG GCGAGAGTGT TGTCGTTGGT CGGTGAACTC GGCGCGAACG TCCTCGACGT CGAACACTCC CGCATCTCCG GCAGGCTCGC GATGGGAGAG GTGGAGATCG CGCTGAAGCT GGAGACCCGT GGTCCCGACC ACTGCGCCGA CGTCGCCGCT CAGCTGCAGC GGGCGGGTTT CCGGCTGTCG TACTGA
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Protein sequence | MGLVSVDTIR EARRLLESVV RKTPMEHARD LEAPHGGPVY LKCENLQRTG SFKIRGAYTR IHGLTEEERA RGVVAASAGN HAQGVALAAS LLGANATVFM PERAPLPKLA ATRGYGADVH LHGDVLEDAL VKATAFAEQT GAVFIHPFDH PDIIAGQGTV GLEILEQVPD VATVVVATGG GGLVGGVASA LKAERPEIRV VGVQAEGAAA FPLSLSAGNP VRLDRMQTMA DGIAVGEPGP ITFEHVRSLV DDVVTVGEES LSRAVLLCLE RRKLVVEPAG AAAVAALLEH PGVFEPPIVA VLSGGNVDPL LLLQIIQHGM TAAGRYLSLR LRVPDRPGSL ARVLSLVGEL GANVLDVEHS RISGRLAMGE VEIALKLETR GPDHCADVAA QLQRAGFRLS Y
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