| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_31210 |
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| Symbol | |
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| ID | 8388445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3389289 |
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| End bp | 3390362 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977150 |
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| Product | ABC transporter periplasmic binding protein, thiB subfamily |
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| Protein accession | YP_003134923 |
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| Protein GI | 257057091 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.194613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.348603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCAGG GACCGGGCCA TGTGTCAACG TCGTTACGCG CGGCGATCGC GCTGCTGTCG
GCCGGTGCCC TCACGGCGGG TTGCACGGTT ATCGGTACCG AGGACGAGTC GGCGGACGAG
CCGGTGACGG TCACTCTCGT CACGCACCAG TCCTGGGCCG TTCCGCAGGA AGTGGTGGAC
GCCTTCGAAC AGCGTGCGGG CGTGCGTATC GAGGTCCGCA AGGAAGGCGA CGCGGGCGAG
CTGACGAACA AGCTCGTGCT GACCAAGGAC AACCCGATCG CGGACGTGGC GTACGGCATC
GACTCGACGT TCGCGTCCAG GGCGTTGTCG GAGGGGGTCT TCCAGCCGTA CACCTCTCCG
GAGGCCGACC GAGGACCGCA GCGGTACGCC GTCGACCGGG AACAGCGATT GTCGGCGGTG
GACGTCGGTG ACGTGTGCGT CAACATCGAC AGCGAGTGGT TCGCCGAGAA CGACGTGCCC
GAACCCACGG GGCTCGACGA CCTCACCGAC CCGATCTACG AGGACCTGTT CGTGGTGCCG
AGCCCGGCCA CGTCGTCTCC GGGGTTGGCC TTCCTGTTCG CCACGGTCTC GGAATACGGC
GAGGACGGCT GGACCGACTA CTGGGGCGAC CTGAAGGACA ACGGGGTGAA GGTCGTCAGC
GGCTGGACCG AGGCGTACAC GCAGGAGTTC TCCGGTTCGT CCGGGGAGGG GGAGCGGCCG
ATCGTGCTGT CCTATGCGTC GTCACCCGCC GCCGAGATCG GACAGGACGG CAAGCCGCGC
ACCAAGGCGC TGCTCGACAC CTGCTATCGC CAGGTCGAGT ACGCGGGCGT GCTGGCGGGG
ACCGAACATC CCGACGAAGC GGGTAAGGTG ATCGACTTCC TGTTGTCGCC CGAATTCCAG
TCCACCCTCC CGGAGAACAT GTACGTGTAC CCCACCCGGG AAGGCGTGCC CCTGCCCGAG
GAGTGGGAGC GGGCCGCGCC GATGCCGCGC GAGTCGATTT CGCTGCCCGG TGAGCAGGTC
CAGGAGAACC GCGAGCGCTG GATCTCGGAA TGGCGCGAGC TACTCGAGGG CTGA
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| Protein sequence | MGQGPGHVST SLRAAIALLS AGALTAGCTV IGTEDESADE PVTVTLVTHQ SWAVPQEVVD
AFEQRAGVRI EVRKEGDAGE LTNKLVLTKD NPIADVAYGI DSTFASRALS EGVFQPYTSP
EADRGPQRYA VDREQRLSAV DVGDVCVNID SEWFAENDVP EPTGLDDLTD PIYEDLFVVP
SPATSSPGLA FLFATVSEYG EDGWTDYWGD LKDNGVKVVS GWTEAYTQEF SGSSGEGERP
IVLSYASSPA AEIGQDGKPR TKALLDTCYR QVEYAGVLAG TEHPDEAGKV IDFLLSPEFQ
STLPENMYVY PTREGVPLPE EWERAAPMPR ESISLPGEQV QENRERWISE WRELLEG
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