| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_31160 |
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| Symbol | |
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| ID | 8388440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3383445 |
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| End bp | 3385367 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977145 |
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| Product | GTP-binding protein TypA/BipA |
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| Protein accession | YP_003134918 |
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| Protein GI | 257057086 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCACAG CCCGCACCGC CACCACTCGG AAAGTTCGTA CCGATCTTCG AAACGTCGCT
ATCGTCGCCC ACGTCGACCA CGGCAAGACC ACGTTGGTCG ACGCGATGCT GCGGCAGGCC
GGCGCCTTCG CCGAACGGTC CGAGCCCGTG GACCGCGTCA TGGACTCCGG TGAGCTGGAG
CGGGAGAAGG GCATCACGAT CCTCGCCAAG AACACCGCCA TCCGCCGTGT CACCCCGAAC
GGGCCGGTGA CCATCAACGT CATCGACACG CCGGGGCACG CCGACTTCGG TGGGGAGGTC
GAGCGCGGTC TTGCGATGGT CGACGGTGTC ATCCTGCTCG TGGACGCCAG TGAAGGCCCG
TTGCCGCAGA CCCGGTTCGT GCTGCGCAAG GCCCTCGCCG CGCGGCTTCC CGTGATCCTC
GTGGTCAACA AGGTCGACCG TGCCGACGCC CGGATCGCCG AGGTCGTCGA GGAAACCCAC
GACCTGCTGC TGGAGCTGGC CGGTGAGATC GAGGGCATGG ACGACGACGC GCTCGACGCG
GTGCTGTCCA TGCCGGTGGT CTACGCGGCC GCCCGGGCGG GGGTGGCGAG CCTGAACCGG
CCCGCCGACG GTGAGTTGCC CGACGGAGAC AGCCTCGATC CGTTGTTCGA CGTGTTGTTG
GAGCACATCC CGGCGCCGCA GGTCGATCCG GACGCGCCGT TGCGGGCGCT CGTCACCAAC
CTGGACGCGT CCAGCTTCCT CGGTCGTATC GCACTGTTGC GGATCCACTC CGGTCGGTTG
CGTAAGGGAC AGACCGTCGC GTGGTTGCGG GAGGACGGGT CCGCGCAGAA CGTCCGGGTG
TCCGAACTGT TCGTCACCGA AGCGCTCACC CGGGTGCCCG CGAAGGAGGC GAGTGCCGGT
GATCTCGTGG CCATCGCGGG GATCCCCGAC ATCACCATCG GCGACACCCT CGCCGATCCG
GAGCATCCCG AACCGTTGCC GCGGATCACG GTGGACGAAC CCGCCATCTC GATGACGTTC
GGGGTCAACA CCTCGCCGCT CGCGGGGCGC GGCGGCGGTG ACAAGCTCAC CGCTCGACTG
CTCAAGGCGA GGTTGGACAG TGAGCTCGTC GGCAACGTCA GTCTTCGGGT GCTGCCCACC
GAACGCCCCG ACACCTGGGA AGTGCAGGGA CGTGGTGAAC TCGCGCTGGC GATCCTCGTG
GAGACCATGC GACGCGAGGG TTTCGAATTG ACCGTCGGCA AGCCCCAGGT GGTCACTCGC
ACCATCGACG GCACGCTGCA CGAGCCGTTC GAACGGCTCT ACATCGACGC GCCCGAGGAG
CACCTCGGCG CCATCACGCA GCTGCTGGCC GCTCGTAAGG GCCGGATGGA ACGGATGGAC
GGTCACGGTA CCGGGCGCGT CAGGTTGGAG TACGTGATCC CGGCGCGGGG TTTGATCGGG
TTCCGCAGCA GTTTCCTCAC CGAGACCAGG GGCACGGGCA TCGCCAACCA CATCTTCGAG
GGCTATTTCC CGTGGGCGGG CGAGATTCGC GCGCGGCACA GTGGATCGCT GGTGGCGGAC
CGGTCCGGCC CCGTCAGCGC CTACGCGCTG CTGCACCTGG CCGACCGCGG CACGTTCTTC
GTCGAACCGG GCGACGAGGT GTACGAGGGC ATGGTCGTGG GTGAGAATCC GCGCGCCGAG
GACCTCGACA TCAACATCAC CAAAGAGAAG AAACTCACGA ACATCCGGTC CTCGACCGCC
GAGGAGCTCG AGCGACTGGC CCGGCCACGC ATCCTCAGCC TGGAGGAGGC GCTGGAGTTC
TGCGCCCCCG ACGAATGCGT CGAGGTCACG CCCAAGGCGG TACGGCTGCG CAAGGTCGTC
CTCGACGTCT CCCAACGCGC CAAACAGCGG TCCAGGGAGC GTCAACGCGA TCGCAACGCC
TGA
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| Protein sequence | MPTARTATTR KVRTDLRNVA IVAHVDHGKT TLVDAMLRQA GAFAERSEPV DRVMDSGELE
REKGITILAK NTAIRRVTPN GPVTINVIDT PGHADFGGEV ERGLAMVDGV ILLVDASEGP
LPQTRFVLRK ALAARLPVIL VVNKVDRADA RIAEVVEETH DLLLELAGEI EGMDDDALDA
VLSMPVVYAA ARAGVASLNR PADGELPDGD SLDPLFDVLL EHIPAPQVDP DAPLRALVTN
LDASSFLGRI ALLRIHSGRL RKGQTVAWLR EDGSAQNVRV SELFVTEALT RVPAKEASAG
DLVAIAGIPD ITIGDTLADP EHPEPLPRIT VDEPAISMTF GVNTSPLAGR GGGDKLTARL
LKARLDSELV GNVSLRVLPT ERPDTWEVQG RGELALAILV ETMRREGFEL TVGKPQVVTR
TIDGTLHEPF ERLYIDAPEE HLGAITQLLA ARKGRMERMD GHGTGRVRLE YVIPARGLIG
FRSSFLTETR GTGIANHIFE GYFPWAGEIR ARHSGSLVAD RSGPVSAYAL LHLADRGTFF
VEPGDEVYEG MVVGENPRAE DLDINITKEK KLTNIRSSTA EELERLARPR ILSLEEALEF
CAPDECVEVT PKAVRLRKVV LDVSQRAKQR SRERQRDRNA
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