| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30890 |
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| Symbol | |
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| ID | 8388413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3349386 |
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| End bp | 3352253 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644977118 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_003134891 |
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| Protein GI | 257057059 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.164673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCTGA ACCGCCTGCT CCGCGCGGGC GAGGGTAAGA TGGTGAAGCG GCTACGCCGC
ATCGCCGATC ACGTCAACAC CCTCGAAGAC GACGTCAAGG ACCTCTCGGA CGCCGAGCTG
CAGGCGAAGA CCGATGAGTT CCGCAAGCGT TACTCCGACG GCGAGTCCCT CGACGACCTA
CTGCCGGAGG CATTCGCCGT GGTGCGGGAG TCCGCCAGGC GCGTGCTGGG GCAGAGGCAC
TACGACGTCC AGCTCATGGG CGGTGCCGCG CTGCACCTGG GGCAGGTCGC GGAGATGAAG
ACCGGTGAGG GGAAGACGCT CACCAGCCTC CTGCCCGTGT ATCTGAACGC GTTGCCGGGC
AAGGGTGTCC ACGTCGTCAC CACCAACGAC TACCTCGCAC AGCGTGACTC CGAGTGGATG
GGTCGTGTCC ACCGGTTCCT CGGCCTGGAG GTCGGGGTCA TCCGGTCGGA TCTGACGCCC
GCCGAGCGTA AGGCCGCCTA CGCCGCCGAC ATCACGTACG GCACGAACAA CGAGTTCGGC
TTCGACTATC TGCGGGACAA CATGGCGTGG AGCCTGGACG ACTGCGTCCA GCGCGGGCAC
TACTACGCGA TCGTCGACGA GGTCGACTCG ATCCTCATCG ACGAGGCCCG GACACCGCTG
ATCATCTCGG GTCCGGCCGA CCAGTCGTCC CGCTGGTACG TCGAGTTCGC GCGGATGGCG
CCGTTGATGA AGCGGGACGT CCACTACGAG GTGGACGAGC GCAAGCGCGC TATCGGTGTC
ACCGAACTGG GGGTCGAGTT CGTCGAGGAC CAGCTCGGGA TCGACAACCT CTACGACGCG
GCGAACACCC CGTTGGTCGG GTTCCTCAAC AACGCCTTGA AGGCGAAGGA GCTCTACCAC
CGGGACAAGG AGTACATCGT CCGCAACGGC GAAGTGTTGA TTGTGGACGA GTTCACCGGC
CGGGTCCTGC CGGGTCGCCG GTTCAACGAG GGCATGCACC AGGCGATCGA GGCCAAGGAA
GGCGTGGAGA TCAAGGCCGA GAACCAGACT CTGGCCACGA TCACCCTGCA GAACTACTTC
CGCCTCTACG AGAAGCTCGC GGGCATGACG GGTACCGCCG AGACGGAGGC GGCCGAGTTC
CACCAGACCT ACAAGCTCGG TGTCGTCCCG ATCCCGACGA ACCGGCCGAT GATCCGTGTC
GACCAGCCCG ACCTCATCTA CAAGACGGAA GAGGCGAAGT TCGAGGCGGT CGCCGACGAC
ATCGCGGAGC GTCACGAGAA GGGCCAGCCG GTGCTGGTCG GTACCACGAG CGTCGAGAAG
TCGGAGTACC TGTCGAAGCT GCTCCTCAAA CGGGGAGTGC CGCATGAGGT GCTCAACGCG
AAGCATCACC ACCGCGAGGC TCTGATCGTC GCGAAGGCGG GGCGGAAGGG TGCCGTCACC
GTCGCGACGA ACATGGCAGG CCGTGGTACG GACATCGTGC TCGGTGGTAA CCCGGACATC
CTCGCCGACG AGGTGTTGCG GGAGCGTGGC CTCGACCCCG TGGAGAACTC CGAGGAGTAC
GAGGCCGAGT GGCCGAAGGT GCTGGAGGAG GTCACCGCCG AGTGCAAGGC GGAGGCCGAG
GAGGTCGTCA AGGCGGGCGG CCTCTACGTG TTGGGCACCG AGCGCCATGA GTCCCGCCGG
ATCGACAACC AGCTGCGCGG CCGTGCCGGA CGTCAGGGTG ACCCGGGTGA GTCCCGTTTC
TACCTGTCGT TGGGCGACGA GCTGATGCGG CGCTTCAACG CGGGCATGGT GGAGCGGGTC
ATGACCACCA TGCGGCTGCC CGACGACGTG CCCATCGAGC ACAAGATGGT CTCCAGGGCG
ATCAAGAGCG CTCAGACGCA GGTCGAGCAG CAGAACATGG AGATCCGCAA GAACGTCCTG
AAGTACGACG AGGTGATGAA CCAGCAGCGC AAGGTCATCT ACGCCGAGCG CCGGAGGGTG
CTGGAGGGCG AGGACCTGCG CGAGCAGATG CGGCACATGA TCACCGACGT CATCACCGCG
TACGTCAACG GCGCCACCGC CGAGGGGTAC GCGGAGGACT GGGATCACGC CAAGCTGTGG
ACCGCGTTGA AGACGCTCTA CCCGGTGAGC GTGACCTGGG AAGAGATCAT CGAGGAGAAC
GAGGACATCG ACGCCGAGCG GCTTCGGGAG ATCCTCGTCG AGGACGCGCT CGCGGCATAC
GACAGGCGTG AGGCCGAGAT CGACGCCAAG GCCGGCGAGG GCGCGATGCG TGAGCTGGAG
CGCCGCGTCG TGCTCTCGGT GCTCGACCGG AAGTGGCGTG AGCACCTCTA CGAGATGGAT
TACCTCAAGG AGGGCATCGG GCTGCGGGCG ATGGCCCAGC GCAATCCGCT CGTGGAGTAC
CAGCGTGAGG GCTTCGACAT GTTCAATGCG ATGCTCGACT CGCTGAAGGA GGAGGCCGTC
GGCCTGGTGT TCAACCTGCA GGTGCAGCAG GCCGAGCAGC AGCAGGCCGA GGAGGCTTCG
AAGACGGAGC AGGCCCGTAA GCCGCAGGCC CCCGCCGCGA GCGGTAACGG CAGGGCTTCC
GGGGCGGCCG CCAAGACGTC GACCCCGCGG CACGCGCGTC CGGTCCCGCC GCAGCCGAAG
ATCCCTGGGC AGTCCGTGCC CGTCGCATTG CAAGGTCAGA AGCTCGGGGG ACAGATCCCG
CAGGGGCTGA CGTTCTCGGG CCCGTCCGAG GGCGGCGGCG TGCAGTCCCG CGGTGACGGT
ACGACCTCGG CGAAGAAGCA AGGTTCGGCT GCCGGTGGTA CACGTCGGGA ACGGCGTGCC
GCCGCCCGCG AACAGGCGAA GAAGAACAAG CGCAACGCGC GCCGTTAG
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| Protein sequence | MLLNRLLRAG EGKMVKRLRR IADHVNTLED DVKDLSDAEL QAKTDEFRKR YSDGESLDDL
LPEAFAVVRE SARRVLGQRH YDVQLMGGAA LHLGQVAEMK TGEGKTLTSL LPVYLNALPG
KGVHVVTTND YLAQRDSEWM GRVHRFLGLE VGVIRSDLTP AERKAAYAAD ITYGTNNEFG
FDYLRDNMAW SLDDCVQRGH YYAIVDEVDS ILIDEARTPL IISGPADQSS RWYVEFARMA
PLMKRDVHYE VDERKRAIGV TELGVEFVED QLGIDNLYDA ANTPLVGFLN NALKAKELYH
RDKEYIVRNG EVLIVDEFTG RVLPGRRFNE GMHQAIEAKE GVEIKAENQT LATITLQNYF
RLYEKLAGMT GTAETEAAEF HQTYKLGVVP IPTNRPMIRV DQPDLIYKTE EAKFEAVADD
IAERHEKGQP VLVGTTSVEK SEYLSKLLLK RGVPHEVLNA KHHHREALIV AKAGRKGAVT
VATNMAGRGT DIVLGGNPDI LADEVLRERG LDPVENSEEY EAEWPKVLEE VTAECKAEAE
EVVKAGGLYV LGTERHESRR IDNQLRGRAG RQGDPGESRF YLSLGDELMR RFNAGMVERV
MTTMRLPDDV PIEHKMVSRA IKSAQTQVEQ QNMEIRKNVL KYDEVMNQQR KVIYAERRRV
LEGEDLREQM RHMITDVITA YVNGATAEGY AEDWDHAKLW TALKTLYPVS VTWEEIIEEN
EDIDAERLRE ILVEDALAAY DRREAEIDAK AGEGAMRELE RRVVLSVLDR KWREHLYEMD
YLKEGIGLRA MAQRNPLVEY QREGFDMFNA MLDSLKEEAV GLVFNLQVQQ AEQQQAEEAS
KTEQARKPQA PAASGNGRAS GAAAKTSTPR HARPVPPQPK IPGQSVPVAL QGQKLGGQIP
QGLTFSGPSE GGGVQSRGDG TTSAKKQGSA AGGTRRERRA AAREQAKKNK RNARR
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