| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30650 |
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| Symbol | |
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| ID | 8388389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3326599 |
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| End bp | 3328203 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977094 |
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| Product | choline dehydrogenase-like flavoprotein |
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| Protein accession | YP_003134867 |
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| Protein GI | 257057035 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.104777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCGC TCTCCCGTAG GCGTCTGCTC GGCCTGCTCG CGGTGAACAC GGCGAGCGCC
CTCGGGCTGG GCACCATCGC CACGCCATCC GCTGCGGCAG CGAGTCGCCG GGACTTCTCG
CCCGCCGTGG TGGTCGGTAC CGGCTACGGC GCCGCCGTGA CGGCGTTGCG GCTCGGGCAG
GCGGGCATCC CCACCGTGAT GCTGGAGATG GGCCGACTCT GGGACACGCC GGGCGACGAC
GGCCGTGTCT TCTGCGACAT GCTCAACCCC GACCGTCGCG CCATGTGGCT GGCCACCCGC
ACGCAGATGC CGCTGTCGTC GTTTTTGTGG CTCGACATCG ACCGCCGCAT CGAGCGCTTC
ACCGGCGTGC TCGACTGCGT CCACCACGGT GACATCTCGG TCTACGTCGG ACGCGGCGTC
GGAGGTGGTT CGCTCGTCAA CGGTGCGATG GCGGTCACGC CGAAGCGAGC GACGTTCGCC
GAGGCGTTCC CCGACGTCGA CAGCGACGGG ATGTACCGAA CCTATTTCCC CCGTGCCGCG
GCGATGCTGG GTGTCAACCA CATCGATCCC GCGTGGTTCG AGACCTGCGA GTCGTACCGC
TACGCGCGTG TGTCCCGAGC CCATGCGCAC AACGCGGGTC TGACCACGAC GTTCGTGCCC
AGCGTCTACG ACTTCGCTCG GATGCGGCGT GAGGAGGCGG GGGAGGTACC CCGGTCGGCG
CTGGCCGCCG AGGTGATCTA CGGCAACAAC CACGGCAAGC GCTCATTGGA CAAGACCTAT
CTCGCCGACG CACTCGGGAC GGGATGTGTG TCGATCCGGA CGCTGCATCA CGTGCGGGCG
ATCGAACAGG ATGCGGACGG CACGTACGTG CTCACCGTCG ACGAGCTCGA TCTCGACGGA
ACCCGTGTGG CCACACGGCA ACTCGGGGCG CGATACCTGT TCCTCGGCGC GGGCAGTCTC
GGTTCGACCG AGTTGTTGCT CCGCGCCCGG GACACCGGGG CCCTGCCCGG GCTCAGCCCC
CTGATCGGCC GGGATTGGGG GCCGAACGGC AACGTGATGG TGGGGCGCGC GAACCGTCCG
CGGGACCGGA CGGGCACCGT GCAGTCGGGA ATGCCCGCGC TCGGCATCGA CGCCTGGGAC
GATCCCCGAC ATCCGGTGTT CGCCGAGGTC GCCCCCATGC CGGCGGGTGT GGAGCTGTGG
GTGAGCCTGT ACCTGGCCGT CACGAGGAAT CCCGAACGAG GCCTCCTCAC GTACGACGCC
GGCTCCGACC GGGTGCGCCT GCACTGGCTA AGCGGGCAGG CACAGCCGTC CGTCGACCAG
GCGAAAGCGT TGTTCGACCG CCTCAACGCC GCGAACGGCA CCGAATACCG GTCGGATCTG
TTCGGCGACA CCCGCGTGTT CGAAACCCGA CTCACCTATC ACCCGCTCGG CGGGGCCGTG
CTCGGCAAGG CGACCGACGC CTACGGCCGG GTGCGGGGAC AGCGCCGTCT CTACGTCACC
GACGGCTCCC TGGTGCCCGG CAACATCGGC GTCAACCCAT TCCTCACCAT CACCGCGTTG
GCCGAGCGCA ACATCGAGCG GATCCTCGCC GAGGACCTGC GTTGA
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| Protein sequence | MRPLSRRRLL GLLAVNTASA LGLGTIATPS AAAASRRDFS PAVVVGTGYG AAVTALRLGQ
AGIPTVMLEM GRLWDTPGDD GRVFCDMLNP DRRAMWLATR TQMPLSSFLW LDIDRRIERF
TGVLDCVHHG DISVYVGRGV GGGSLVNGAM AVTPKRATFA EAFPDVDSDG MYRTYFPRAA
AMLGVNHIDP AWFETCESYR YARVSRAHAH NAGLTTTFVP SVYDFARMRR EEAGEVPRSA
LAAEVIYGNN HGKRSLDKTY LADALGTGCV SIRTLHHVRA IEQDADGTYV LTVDELDLDG
TRVATRQLGA RYLFLGAGSL GSTELLLRAR DTGALPGLSP LIGRDWGPNG NVMVGRANRP
RDRTGTVQSG MPALGIDAWD DPRHPVFAEV APMPAGVELW VSLYLAVTRN PERGLLTYDA
GSDRVRLHWL SGQAQPSVDQ AKALFDRLNA ANGTEYRSDL FGDTRVFETR LTYHPLGGAV
LGKATDAYGR VRGQRRLYVT DGSLVPGNIG VNPFLTITAL AERNIERILA EDLR
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