Gene Svir_30420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30420 
Symbol 
ID8388366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3293515 
End bp3294114 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content70% 
IMG OID644977071 
Producthypothetical protein 
Protein accessionYP_003134844 
Protein GI257057012 
COG category[S] Function unknown 
COG ID[COG5483] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.711369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.230414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAGA CGACGCCCGC GGGCAACGGC GAGACCACGT CGGGACCTTC GCTGGTCACG 
TTCGGTCATG GCACCGCCGA CGCCGGGACG ATGACCCGCC TGCTGCACGG TGCCGGGATA
CGGCGCCTGG TCGACGTGCG CACCGCCCCC GGCAGTCGGC GCAATCCCGA CGCGTCCCGG
GCCGCCATGA CCGACTGGTT GTCCCGAGCC GGTGTCGACT ACCGCTGGGA CAGACGACTG
GGCGGCTGGC GGAAAGCCTC CCCGGCTTCC CCCGACGTCG CCCTGCGCAA CGAATCCTTC
CGCGGCTACG CCGAGCACAT GCGCACAGCG GAGTTCCGCG CGGCCGTCGA GGAACTCCGC
GCCGACGTCG AGGCCGATCC CACCGCGGTG TTGTGCGCGG AATCGGTGTG GTGGCGCTGC
CATCGCAAGC TGATCGCCGA CTTCCTCGTG CTGGTACACG GCATCGCCGT GCACCACCTC
ATGCATGACG GTTCACTGCG ACCCCACAGC CCCAGCCCGG CAGCCCGCCT GATCCCCGAC
GAACGGGTGC TTATCTACGA CGAGGACGGC TCGTCCAGGG GGTCGGGACA CAGCGGATGA
 
Protein sequence
MRQTTPAGNG ETTSGPSLVT FGHGTADAGT MTRLLHGAGI RRLVDVRTAP GSRRNPDASR 
AAMTDWLSRA GVDYRWDRRL GGWRKASPAS PDVALRNESF RGYAEHMRTA EFRAAVEELR
ADVEADPTAV LCAESVWWRC HRKLIADFLV LVHGIAVHHL MHDGSLRPHS PSPAARLIPD
ERVLIYDEDG SSRGSGHSG