| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30110 |
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| Symbol | |
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| ID | 8388335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3256910 |
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| End bp | 3258319 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977042 |
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| Product | putative amidase |
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| Protein accession | YP_003134815 |
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| Protein GI | 257056983 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00374017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGCA CGCCGCCCAT GCTGACCGCG AGCGAACTCG TCGCCGCCTA CTCCGCGGGC
GAGTTGTCGC CGGTCGAGGC CACCCGCGCC GCGCTCGACG CCATCGACGA GTACGACCCG
GAGTACCACG CCTTCACCCT CGTCGACCCG GAATCGGCAT TGGCCGCGGC CCGGGGTTCG
GAGGAACGGT GGCGCGAAGG GAACCCGATC GGCTGGCTCG ACGGTGTTCC GGCGTTGGTG
AAGGACATGT TCCTCACCCG GGGTTGGCCC ACGTTGCGCG GATCGCTGTG CATCGACCGC
GACCGGCCGT GGGAGGTCGA CAGCCCCATC ACCGCGCGAA TGCGGGAACA CGGCCTGGTA
CTGCTCGGCA AGACCACCAC CCCCGAACTG GGGTGGAAGG CCGTGACCGA CAGTCCGCTC
GACGGCGTCA CCCGCAACCC CTGGGACCCG GCCCTCACCT CCGGTGGGTC GAGCGGCGGC
AGCGCGGTCG CCGTGGCCAC CGGGATGGGC GAGTTGTCCG TGGGCACCGA CGGCGGTGGG
TCCGTGCGTA TCCCGGCCTC GTTCTGCGGC ATCGTCGGCT TCAAACCCAC GGGCGGACGC
ATTCCGCTGT ACCCGGCCAG TCCGTTCGGC GCTCTGGCCC ACGCGGGGCC GATGGCCCGC
TCGGTCGACG ACGTGGCGCT GCTGTTGGAC GTGCTCGCCA TGCCGGACCA CCGTGACCCC
TCCTCGCTGC CGCTGTCGTC CGGCACCTAC CGCGAAGCCG TGCGTCGTGA CGTCCGCGGG
CTTCGGGCCG CCTATTCCCC CGCTCTCGGC TACCTCGACG TCGATCCGGA GATCACCCAA
CTCGTGGCGT CGGTGGTGGC TGTGCTCGGT GAGGCGGGGT TGACCGTGGA GGAGGCCGAT
CCCGGGTTCA CCGACCCGAT CGAGGCGTTC GGGGTGCTGT GGTCCACGGG AGCGGCGAAG
TGGCTCGACT CGTTCCCGGA GGGTTCGGGA CACCGGGTCG ACCCCGGACT GCGCAGGGTA
TGGGAACGGG GACGCACCTA CTCGGCCCGG GACTACCTCG ACGCCACCGC CGAACGCATG
GCGTTGGGCA TCCACATGGG AGAGTTCCAC ACCCACTACG ACGTGCTGCT CACCCCGACC
ATGCCGGTGC AGCCGTTCGA GGTGGGGCAT GACGTGCCGC CCGGCAGCGG TTTGACCGAC
TGGCCGCAGT GGACCGGGTT CACCTATCCG TTCAACATGA CGCAGCAGCC CGCTGTCAGC
GTGCCCGCCG GGTTCACGTC GCAGGGGCTG CCCGTGGGGT TGCAGATCGT GGGGCCGCGC
CATTCCGACG ACCTCGTGTT GGCGGTGGCC CGGTTGGTGG AGGAGCTCCG CCCCTGGCCG
ACCGGGCGAC CGACCAGGAG CCGTGACTGA
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| Protein sequence | MSSTPPMLTA SELVAAYSAG ELSPVEATRA ALDAIDEYDP EYHAFTLVDP ESALAAARGS
EERWREGNPI GWLDGVPALV KDMFLTRGWP TLRGSLCIDR DRPWEVDSPI TARMREHGLV
LLGKTTTPEL GWKAVTDSPL DGVTRNPWDP ALTSGGSSGG SAVAVATGMG ELSVGTDGGG
SVRIPASFCG IVGFKPTGGR IPLYPASPFG ALAHAGPMAR SVDDVALLLD VLAMPDHRDP
SSLPLSSGTY REAVRRDVRG LRAAYSPALG YLDVDPEITQ LVASVVAVLG EAGLTVEEAD
PGFTDPIEAF GVLWSTGAAK WLDSFPEGSG HRVDPGLRRV WERGRTYSAR DYLDATAERM
ALGIHMGEFH THYDVLLTPT MPVQPFEVGH DVPPGSGLTD WPQWTGFTYP FNMTQQPAVS
VPAGFTSQGL PVGLQIVGPR HSDDLVLAVA RLVEELRPWP TGRPTRSRD
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