Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_30040 |
Symbol | |
ID | 8388328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3248449 |
End bp | 3249030 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644977035 |
Product | hypothetical protein |
Protein accession | YP_003134808 |
Protein GI | 257056976 |
COG category | [S] Function unknown |
COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000857921 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCG GTTCTCCCCG TGAACGCGTT CTCGACGCCG TGTTCCGTCT CGTCGCGCAA GGTGGTCTCA CCGAGGCGTC ACTGCGGAAG GTCGCCGCCG AGTCCGGTGT CAACATCGGG TCCGTCCGCC ATTACTACGG CACACACGAG CAGTTGATGA TCGCCGCTGC CGAGGAGGTC GGCAGGCGAA TGGAACGACG ACTCAACGCC GTATGGCCGG CGGACCTCGG CGAGAGCGAC GTGGCGGCGC GGCGGGAACT CGTCGAATCG GTGTGCCGTG CAGTGTTGCC GACCGGCCGC GACGACCGGG TCGAACTCGT GGTCCTGTTG GAGCTCGTCG CCGCCGCACG GCTGCGCCCT GAGTTCCGGC CCCTTGCGAC GCGGATGGGG AAAGACCTGC GTGCCGTCCT GGTCGCGACG TTGGAAACCG TGGGAGTGAA GCAGGCCGCG CTGGAGGCGG AACGGCTGAC CGCGCTCGTC ATCGGTCTCA CCACCGAATT CATCTACCCC CACGGGCTGC CCGACGACGA TGTGGTGACC CGCGTGCTGC GCCACCACAT CGCCGAGTTG TTGCCCGACT GA
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Protein sequence | MTSGSPRERV LDAVFRLVAQ GGLTEASLRK VAAESGVNIG SVRHYYGTHE QLMIAAAEEV GRRMERRLNA VWPADLGESD VAARRELVES VCRAVLPTGR DDRVELVVLL ELVAAARLRP EFRPLATRMG KDLRAVLVAT LETVGVKQAA LEAERLTALV IGLTTEFIYP HGLPDDDVVT RVLRHHIAEL LPD
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