Gene Svir_29920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29920 
Symbol 
ID8388316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3233654 
End bp3233866 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content61% 
IMG OID644977023 
ProductLSU ribosomal protein L31P 
Protein accessionYP_003134797 
Protein GI257056965 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0254] Ribosomal protein L31 
TIGRFAM ID[TIGR00105] ribosomal protein L31 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.568534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCG GTATTCATCC CGACTACCAC GTCACCACGG TGGTCTGCGG TTGCGGTAAC 
ACCTTCACCA CTCGCAGCAC CGCTCCGTCC GACACCATCC ACGTCGAGAT CTGCTCGAAC
TGCCACCCCT TCTACACGGG TAAGCAGAAG ATCCTCGACA CCGGTGGTCG GGTGGCGCGC
TTCGAGGCCC GTTACGGCAA GCGCAAGAAG TAG
 
Protein sequence
MKSGIHPDYH VTTVVCGCGN TFTTRSTAPS DTIHVEICSN CHPFYTGKQK ILDTGGRVAR 
FEARYGKRKK