| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29360 |
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| Symbol | |
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| ID | 8388260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3178494 |
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| End bp | 3179189 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644976967 |
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| Product | Phosphocarrier protein HPr/PTS system IIA component |
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| Protein accession | YP_003134741 |
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| Protein GI | 257056909 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3412] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family
[TIGR02364] dihydroxyacetone kinase, phosphotransfer subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.521811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGGTCG GCCTCGTCCT GGTGTCCCAC AGCGCCAAGC TCGCCGAGGG ACTCGCCGAG
GTCGCCGAGC AGATGGCGCC GAACGTCACC GTGCTACCCG CAGGGGGGAC GCCAGACGGC
GGCATCGGCA CCGACTACGA CTCCGTGGTC TCCGCTGTGC GCCAGGCCGA CGGCGGGGCC
GGTGTCGTGG TGCTGTACGA CCTCGGGAGT GCGCAGATGA CGGCCGAACT GGTGGTGGAG
TCGCTCGACG ATCCCGGTGC GGCTGTGGTG GTGGACGCAC CCTTGGTGGA GGGCGCCGTG
GCGGCGGCGG TGGCCGCACA GGGCGGCGCT GATCGAGCGG GTGTGGCACA AGCCGCGATC
GACGCCGGTC GGGGTGCCGA GCAACGAGAG GCGCCGATCG CGGAGGCGGC CGAGGAGACC
GCGTCCGACG TGGTGCGAAC CGAGTTGACG TTGCGCAACG AGATCGGATT GCACGCGCGG
CCCGCGGCGT TGTTGGTGCG GGCCATCGCC GGTGTGGAAG CGGACGTCCG GCTCCGGTTC
GGTGACGATG AGGCCGACGG GCACAGTGTT CTGGCCATCA TGTCGCTGGG CGCGCGTCAG
GGGGACCGCA TCGGTGTCGA GGCCACCGGA CCACAGGCGC GTGAGGCGAT CGACCGTATC
GAGGCGTTGG TCGAGCGCAA TTTCGAGGAA GGCTGA
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| Protein sequence | MRVGLVLVSH SAKLAEGLAE VAEQMAPNVT VLPAGGTPDG GIGTDYDSVV SAVRQADGGA
GVVVLYDLGS AQMTAELVVE SLDDPGAAVV VDAPLVEGAV AAAVAAQGGA DRAGVAQAAI
DAGRGAEQRE APIAEAAEET ASDVVRTELT LRNEIGLHAR PAALLVRAIA GVEADVRLRF
GDDEADGHSV LAIMSLGARQ GDRIGVEATG PQAREAIDRI EALVERNFEE G
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