Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_29320 |
Symbol | |
ID | 8388256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3175238 |
End bp | 3175984 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644976963 |
Product | predicted hydrolase or acyltransferase of alpha/beta superfamily |
Protein accession | YP_003134737 |
Protein GI | 257056905 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGATC TGCCGTTGGT GTTGCTGCAC GCCTATCCCC TCGACGCCCG TATGTGGAAC TCCGTACGGG CGCCGCTGGC CGAGCGGACC CGGTTGATCA CACCGGATCA GCGCGGCCTG GGGCGCTCAC CACTGCCTTC GGACCTTGCC GAACCGGACC TCGACCATGC CGCCCGCGAC GTCGTGGCGC TGCTGGACCG CCTCGACCTC GACAAGGTCG TGCTCGGCGG CTGTTCGATG GGCGGTTACG TGACGTTCGC CGTGTTGCGA CTCGCGCCCG AACGCGTGGG AGGACTCGTG CTCATCGACA CCAAGGCGGA GGCCGACACC GACGCGGCGC GAAAGAACCG GTTGGCGGTG GCTCGACGGG CCGAGACCGA GGGCATCCAC GGTTGGCTGG CCGATTCGAT GCTGCCGAAC CTACTGGGCG AGACCACCCG CAGCCGTCGT CCCGAACTGG TCGAGCACGT GCGTGGACTC ATCGAGCAAC AACCGCCCGC CGGGGTGGCG TGGGCGCAAC GAGCGATGGC CGCACGCCGT GACGCCACGG ACGTCCTGCG TGCAACGGAC GTGCCGGCCG TGGTGGTCGT GGGCGAGGAG GACACCGTGA CCCCGCCCCA GGCGGCGTGT GATATTGCCG ACATTCTGCC TCGTGGGGAG CTTGTCGTGC TTCCCGAAGC GGGCCACCTG ACGCCGTTGG AGGCCCCCGA AGGAGTGGTC GACGCGGTCT TTCGTGTGCT GGGCTGA
|
Protein sequence | MSDLPLVLLH AYPLDARMWN SVRAPLAERT RLITPDQRGL GRSPLPSDLA EPDLDHAARD VVALLDRLDL DKVVLGGCSM GGYVTFAVLR LAPERVGGLV LIDTKAEADT DAARKNRLAV ARRAETEGIH GWLADSMLPN LLGETTRSRR PELVEHVRGL IEQQPPAGVA WAQRAMAARR DATDVLRATD VPAVVVVGEE DTVTPPQAAC DIADILPRGE LVVLPEAGHL TPLEAPEGVV DAVFRVLG
|
| |