Gene Svir_29320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29320 
Symbol 
ID8388256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3175238 
End bp3175984 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content69% 
IMG OID644976963 
Productpredicted hydrolase or acyltransferase of alpha/beta superfamily 
Protein accessionYP_003134737 
Protein GI257056905 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATC TGCCGTTGGT GTTGCTGCAC GCCTATCCCC TCGACGCCCG TATGTGGAAC 
TCCGTACGGG CGCCGCTGGC CGAGCGGACC CGGTTGATCA CACCGGATCA GCGCGGCCTG
GGGCGCTCAC CACTGCCTTC GGACCTTGCC GAACCGGACC TCGACCATGC CGCCCGCGAC
GTCGTGGCGC TGCTGGACCG CCTCGACCTC GACAAGGTCG TGCTCGGCGG CTGTTCGATG
GGCGGTTACG TGACGTTCGC CGTGTTGCGA CTCGCGCCCG AACGCGTGGG AGGACTCGTG
CTCATCGACA CCAAGGCGGA GGCCGACACC GACGCGGCGC GAAAGAACCG GTTGGCGGTG
GCTCGACGGG CCGAGACCGA GGGCATCCAC GGTTGGCTGG CCGATTCGAT GCTGCCGAAC
CTACTGGGCG AGACCACCCG CAGCCGTCGT CCCGAACTGG TCGAGCACGT GCGTGGACTC
ATCGAGCAAC AACCGCCCGC CGGGGTGGCG TGGGCGCAAC GAGCGATGGC CGCACGCCGT
GACGCCACGG ACGTCCTGCG TGCAACGGAC GTGCCGGCCG TGGTGGTCGT GGGCGAGGAG
GACACCGTGA CCCCGCCCCA GGCGGCGTGT GATATTGCCG ACATTCTGCC TCGTGGGGAG
CTTGTCGTGC TTCCCGAAGC GGGCCACCTG ACGCCGTTGG AGGCCCCCGA AGGAGTGGTC
GACGCGGTCT TTCGTGTGCT GGGCTGA
 
Protein sequence
MSDLPLVLLH AYPLDARMWN SVRAPLAERT RLITPDQRGL GRSPLPSDLA EPDLDHAARD 
VVALLDRLDL DKVVLGGCSM GGYVTFAVLR LAPERVGGLV LIDTKAEADT DAARKNRLAV
ARRAETEGIH GWLADSMLPN LLGETTRSRR PELVEHVRGL IEQQPPAGVA WAQRAMAARR
DATDVLRATD VPAVVVVGEE DTVTPPQAAC DIADILPRGE LVVLPEAGHL TPLEAPEGVV
DAVFRVLG