| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29310 |
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| Symbol | |
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| ID | 8388255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3173172 |
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| End bp | 3174956 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644976962 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_003134736 |
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| Protein GI | 257056904 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.426648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGCCG TAGCGCCCCA GCCGATCGCA ACGCGTCCGT ACCCGACGCG AAAGCCGGTG
AAGGGATCGA CCCTGCTGCG GTTGTTCCGC ACGACGGACC ACAAGCAGCT TGGCATCATG
TACCTGGTGA CCACCTTCGC CTTCTTCCTG GCGGGTGGTG CGATGGCGAT GCTGATCCGT
ACCGAGCTCG CGGTGCCCGG GCAGCAGTTC CTGTCGCAGG AGCAGTACAA CCAGCTGTTC
ACCATGCACG GCACGGTGAT GCTGCTCTTC TACGCGACGC CCATCGTGTT CGGGTTCGCC
AACTACGTCA TGCCGCTGCA GATCGGGGCC CCGGACGTCG CGTTCCCGCG GTTGAACGCG
TTCTCGTACT GGCTGTTCCT GCTCGGCGGG CTCACCGCGA TGGCGGGCTT CATCACCCCG
GGCGGCGCCG CTGACTTCGG CTGGTTCGCC TACACCCCGC TGGCGAACGC CGTCTACTCG
CCGGGCATCG GTGCGGACCT GTGGGTCGCC GGCCTGATCG TCAGTGGTCT GGGCACCATC
CTCGCCGCGG TCAACATGAT CACCACCATC GTGTGCCTGC GCGCGCCGGG CATGACGATG
TGGCGGATGC CCATCTTCAC GTGGAACATC CTCGTCACCA GCGTCCTCGT GCTGATGGCG
TTCCCGATCC TGACCGCCGC ACTCGTGGGT CTGCTCGCCG ACCGGCGCGT CGGTGCCCAC
GTCTTCGACC CCGCCAACGG GGGCGTGATC CTGTACCAGC ACATGTTCTG GTTCTTCGGG
CACCCCGAGG TCTACATCGT CGCGCTGCCG TTCTTCGGTA TCGCCTCGGA GATCATCCCG
GTCTTCGCCC GTAAGCCGAT CTTCGGTTAC AAGGGTCTGG TCTGGGCGAC CCTCGCCATC
GCCGCGCTGT CGGTGTCGGT GTGGGCGCAC CACATGTACG CCACGGGTGC GGTGCTGCTG
CCGTTCTTCG CCTTCATGAC CTTCCTCATC GCCGTCCCGA CCGGCGTGAA GTTCTTCAAC
TGGATCGGCA CGATGTGGAA GGGACACCTG ACCTTCGAGT CGCCGATGCT GTTCACCATC
GGCTTCATGG TCACCTTCCT CTTCGGTGGC CTGTCCGGTG TTCTGCTGGC CGCCCCGGCG
ATCGACTTCC ACGTCTCCGA CACCTACTTC GTGATCGCGC ACTTCCACTA CGTGCTCTAC
GGCACGATCG TGTTCGCGAC GTTCGCCGGG ATCTACTTCT GGTTCCCGAA GATCACCGGC
CGCATGATGG ACGAGCCGCT GGCCAAGCTG CACTTCTGGC TCACGTTCGT CGGCTTCCAC
CTCACGTTCC TGGTGCAGCA CTGGCTCGGT AACGAGGGCA TGCCCCGCCG GTACGTGGAC
TACCTCGCCA GCGACGGGTT CACCACGCTG AACGTGATCT CCACGATCGG CGCCTACATC
CTGGGTGCGT CCACGCTGCC GTTCATCTGG AACGTCTTCA AGAGCTACCG CTACGGTGAG
ATCGTCACCG TGGACGACCC GTGGGGTTAC GGCAACTCGC TGGAGTGGGC CACCAGCTGC
CCGCCGCCGC GGCACAACTT CACCGAGCTG CCGCGGATCC GGTCCGAGCG TCCGGCGTTC
GAGTTGCACT ACCCGCACAT GATCGAGCGG ATGCGTAAGG AAGCCCACAC GTCCTTCACC
GGTAAGCCGC TGCCTCCGAA GGAGGCCGTG GAGGTACCGT CCGAACTCGT CACCTCAGCG
GCGAAGCCGG GCGACGGGGA CAAGGACAAC GCAAGCGAGA AGTGA
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| Protein sequence | MTAVAPQPIA TRPYPTRKPV KGSTLLRLFR TTDHKQLGIM YLVTTFAFFL AGGAMAMLIR
TELAVPGQQF LSQEQYNQLF TMHGTVMLLF YATPIVFGFA NYVMPLQIGA PDVAFPRLNA
FSYWLFLLGG LTAMAGFITP GGAADFGWFA YTPLANAVYS PGIGADLWVA GLIVSGLGTI
LAAVNMITTI VCLRAPGMTM WRMPIFTWNI LVTSVLVLMA FPILTAALVG LLADRRVGAH
VFDPANGGVI LYQHMFWFFG HPEVYIVALP FFGIASEIIP VFARKPIFGY KGLVWATLAI
AALSVSVWAH HMYATGAVLL PFFAFMTFLI AVPTGVKFFN WIGTMWKGHL TFESPMLFTI
GFMVTFLFGG LSGVLLAAPA IDFHVSDTYF VIAHFHYVLY GTIVFATFAG IYFWFPKITG
RMMDEPLAKL HFWLTFVGFH LTFLVQHWLG NEGMPRRYVD YLASDGFTTL NVISTIGAYI
LGASTLPFIW NVFKSYRYGE IVTVDDPWGY GNSLEWATSC PPPRHNFTEL PRIRSERPAF
ELHYPHMIER MRKEAHTSFT GKPLPPKEAV EVPSELVTSA AKPGDGDKDN ASEK
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