| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29270 |
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| Symbol | |
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| ID | 8388251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3168650 |
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| End bp | 3170704 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644976958 |
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| Product | DNA helicase, Rad3 |
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| Protein accession | YP_003134732 |
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| Protein GI | 257056900 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.318454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGATG TCCCTTCGGA ACTGCCCAGT GTCCGCGAAC TCCTCTCCCA CGCCGTCGAA
GCGGTGGGCG GTACCGAACG TGAAGGCCAG CTACGCATGG CCGACGCCGT GGACCACGCC
ATCCGCACGG GCGAACACCT CGCCGTGCAG GCGGGTACGG GTACGGGGAA GTCGCTCGCC
TACCTGGTTC CGGCGATCCG TCATGCCGTG GCCTGCGACA CCACCGTGGT GGTCTCGACG
GCGACGATCG CACTACAGCG CCAGCTGGTC GACCGTGACC TCCCCCGGCT GGCCAAGGCG
CTGAAGAAAC CACTCGGCGT GGAACCGACG TTCGCGATCC TCAAAGGCAG ACGCAACTAC
CTGTGCCTGT ATCGCGTGCA CAACGGGGTC GAGGACGACC CCGAGGACAC CGCCCTGTTC
GATCCGTTCG CCGTCTCCCG TCTGGGCCGC GAGGTCAAGC GACTCCACCA GTGGTCGTCC
GACACCGAAA CGGGTGATCG CGACGAGCTG GTCCCCGGTG TCTCCGAACA GGCGTGGCGG
CAGGTGTCGG TGACCGCGAA GGAGTGTCTC GGCGCGACTC GCTGTCCCGT CGGTGACGAC
TGCTTCGCCG AACTCGCCCG CGCGGAGGCG AGCAGAGCCA ACATCGTGGT CACCAACCAC
GCGCTCCTGG CCATCGACGC GCTGCAGGAC TACCAGGTGC TGCCCGAACA CGACGTCACG
ATCATCGACG AGGCCCACGA ACTGGTGGAC CGCGTGACGT CGACGGCCAC GGCCGACCTG
TCACCCGCCA TGGTGTCGAC GGCGGCACGC CGGTGCGGCA GGCTCGTCGA CGCCGACATC
GCCGACCGGC TGCTGGAAAC CGGTGAGGGC CTGTCGCTGA TGTTGGAGGA CGTGCCGGCG
GGTCGACTCG ATGTCCTGCC GGACGCTCTG GGTGGCGCGC TCGCGGCCGT GCGCGACGCG
GCGCACGCCT GTATCACCGC GCTCGGCTCC GACCGCAGGG AGGACCCCGA GGAGGCCGCC
AAGCGTAAAC TCGCCCGCTC CGCGCTCGAC GACGTGCACG ACACCGCCGT CCGGTTGTTG
GAGGCGTTCG AGGACGAGCT CTCCGAACGC CGTGACGTGG TGTGGTGTTC GGGTGGCCGG
CACACGGCGT CCCCGAGGCC GCCCGCCCTG CACATCGCGC CGCTGAGTGT CGGGGGTCTG
CTGCGTGAAC GCGTCTTCGG CACGAGCACG ACGGTGCTCA CCTCGGCGAC ACTCGCGCTC
GGCGGCACGT TCGACACACT GGCCCGGCAG TGGGGGCTGC CGCCGGTTTC ACAACCCACC
GAACAGGCAC AGGGCGCCGC CACGGAGAAA CCACCACCGT CGGACGTCGA CCCCGGGCCA
CGCTGGCGCG GATTGGACGT CGGATCGCCG TTCGACTACC GCCGCAACGG CATCCTCTAC
ATCGCGGGGC ATCTGCCCCG ACCGGGCCGC GACGGACTCA GCCAGGCCGC CTTGGACGAG
ATCGCGGAGC TGATCGACGC GGCGGGCGGT CGCACCCTCG GATTGTTCTC GTCCATGCGG
GCCGCCAAGC AGGCCACCGA GGAGCTGCGC GACCGGGTCG CACATCCGAT CCTGTGCCAG
GGGGAGGACT CCACCTCGCT GCTGGTCAAC AAGTTCGCCG AAGACCCTCG AACGTGTCTG
TTCGGCACTT TGTCGCTGTG GCAGGGTGTG GACGTCCCGG GGCCCTCGCT GTCGCTCGTC
ATCGTGGACC GGCTGCCGTT CCCCCGACCC GATGATCCGG TGGCCTCGGC ACGACAGCGC
GCGGTGGAGG CACGCGGCGG CAACGGCTTC CTCACCGTCG CCGCCACCCA CGCCGCACTG
CTGTTGGCCC AGGGCGTGGG CAGACTGCAT CGCGCCAGCA GCGACAAGGG CGTGGTGGCG
GTGCTGGATT CCAGGCTTGC CACGGCCCGG TACGGCGGAT TCATCCGGGC TTCACTGCCC
CCGTTGTGGC CGACGCAACG GGCCGACGTC GTCCGCGACG CACTGCGCAG ACTCGACGCC
GCGGCCCCGG CCTGA
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| Protein sequence | MTDVPSELPS VRELLSHAVE AVGGTEREGQ LRMADAVDHA IRTGEHLAVQ AGTGTGKSLA
YLVPAIRHAV ACDTTVVVST ATIALQRQLV DRDLPRLAKA LKKPLGVEPT FAILKGRRNY
LCLYRVHNGV EDDPEDTALF DPFAVSRLGR EVKRLHQWSS DTETGDRDEL VPGVSEQAWR
QVSVTAKECL GATRCPVGDD CFAELARAEA SRANIVVTNH ALLAIDALQD YQVLPEHDVT
IIDEAHELVD RVTSTATADL SPAMVSTAAR RCGRLVDADI ADRLLETGEG LSLMLEDVPA
GRLDVLPDAL GGALAAVRDA AHACITALGS DRREDPEEAA KRKLARSALD DVHDTAVRLL
EAFEDELSER RDVVWCSGGR HTASPRPPAL HIAPLSVGGL LRERVFGTST TVLTSATLAL
GGTFDTLARQ WGLPPVSQPT EQAQGAATEK PPPSDVDPGP RWRGLDVGSP FDYRRNGILY
IAGHLPRPGR DGLSQAALDE IAELIDAAGG RTLGLFSSMR AAKQATEELR DRVAHPILCQ
GEDSTSLLVN KFAEDPRTCL FGTLSLWQGV DVPGPSLSLV IVDRLPFPRP DDPVASARQR
AVEARGGNGF LTVAATHAAL LLAQGVGRLH RASSDKGVVA VLDSRLATAR YGGFIRASLP
PLWPTQRADV VRDALRRLDA AAPA
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