| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29160 |
|---|
| Symbol | |
|---|
| ID | 8388240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3160955 |
|---|
| End bp | 3161905 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644976947 |
|---|
| Product | cysteine synthase |
|---|
| Protein accession | YP_003134721 |
|---|
| Protein GI | 257056889 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTT ACGAATCCCT TCTCGACGCT CTCGGCGGCA CCCCGCTGGT GGGGTTGCCG
CATCTGTCGC CCTCCGACGA TGTGCGTCTG TGGGCGAAGC TGGAGGACCG CAATCCCACC
GGTTCGATCA AGGACCGCCC CGCGCTGGCG ATGATCGAGG CGGCCGAACG GGACGGCGTC
CTCAAGCCCG GGGACACGAT CCTGGAGCCG ACGTCCGGCA ACACCGGTAT CTCGTTGGCG
ATGGCCGCCA AGCTCAAGGG CTACGGCATG GTCTGCGTGA TGCCGGAGAA CACCTCGGAG
GAACGCAGGC AGCTGCTGCA GGCGTACGGT GCCCGGATCG TGTACTCACC CGCGGCGGGT
GGTTCCAACG AGGCGGTGCG GCGAGCGAAG GAACTGGCGA AGCTCAACCC GGACTGGGTC
ATGCTGTACC AGTACGGCAA TCCCGCGAAC GCGGAGGCCC ACTACCGCGG GACGGGTCCG
GAACTTCTGG AGGATCTGCC GACGCTGACC CACTTCGTCG GTGGGCTCGG TACCACGGGC
ACGTTGATGG GCGTGGGGCG ATACCTGCGG GAACACAAAC CGGATGTGCA GATCATCGCC
GCCGAACCCC GTTACGGGGA GCTGGTGTAC GGCCTGCGCA ACATCGACGA GGGATTCATC
CCCGAACTCT ACGACCCGGA TGTGCTCAAC GGCCGTTACT CCGTGGGCGC CTACGACGCG
CTGCGCCGGG CTCGGCAGCT GCTGGAGTGC GAGGGCATCT TCGCGGGCAT CTCCACCGGT
GCGGTGCTGC ATGCGGCGCT GGGAGTGGCC AACAAGGTGC TGAAGAAGGG CGGTACGGCC
GACATCGCGT TCGTGGTGGC CGACGCCGGA TGGAAGTACC TGTCCACCGG TGCCTACAGC
GGTTCGCTCG ACGAGGCCGC CGAACGGCTC GACGGTCAGC TCTGGGCGTG A
|
|---|
| Protein sequence | MARYESLLDA LGGTPLVGLP HLSPSDDVRL WAKLEDRNPT GSIKDRPALA MIEAAERDGV
LKPGDTILEP TSGNTGISLA MAAKLKGYGM VCVMPENTSE ERRQLLQAYG ARIVYSPAAG
GSNEAVRRAK ELAKLNPDWV MLYQYGNPAN AEAHYRGTGP ELLEDLPTLT HFVGGLGTTG
TLMGVGRYLR EHKPDVQIIA AEPRYGELVY GLRNIDEGFI PELYDPDVLN GRYSVGAYDA
LRRARQLLEC EGIFAGISTG AVLHAALGVA NKVLKKGGTA DIAFVVADAG WKYLSTGAYS
GSLDEAAERL DGQLWA
|
|---|
| |