Gene Svir_29120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29120 
Symbol 
ID8388236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3157956 
End bp3158567 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content68% 
IMG OID644976943 
Productubiquinone/menaquinone biosynthesis methylase 
Protein accessionYP_003134717 
Protein GI257056885 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCGCGA CCGCGGACGC CTACGACGCC GTCGCCATCC GCTACGCCGA GCTCGTCAGG 
GACGGGCTGG ACAACCTGCC ACTGGATCGC GCGACGCTCG CCGCCTTCGC CGAGTACACG
CCCACCGCCG GTCCTGTCGC CGAGCTGGGT TGCGGACCCG GCTACGTGGC GGCCCATCTG
CACGAGCTGG GATTGGACGT CTTCGGCGTC GACCTGTCGC CGGCCCTGAT CGAGCTGGCC
CGCAAGCGTT ACCCGTTGCT GCGGTTCGAG GTCGGTTCGA TGGACGCCCT GGAAGTGGCC
GACGGAACCC TACACGGCAT CGTCTCCTGG TATTCGATCA TCCACGCCCC GCCGCGGGAG
TTACCCTCCT ACCTCACCGA GTTCCGCCGT GTGCTGGTAC GTGGCGGCAC CCTGCTGCTC
GCTTTCTTCG AATCCGAAGG TGGGCCGGTG GAGGCGTTCG ACCACAAAGT GGTGACCGCC
TACCGGTGGC CGATCGACGA TCTCGCCGAC CTAGCGGGCG AGGCGGGATT CGAGGAGATC
GGCCGCGTAC TTCGTCAACC TCTCGCCGAG GAGCGCTACC GCCGCGGTCA CCTGCTCCTG
CGGGCACGCT GA
 
Protein sequence
MRATADAYDA VAIRYAELVR DGLDNLPLDR ATLAAFAEYT PTAGPVAELG CGPGYVAAHL 
HELGLDVFGV DLSPALIELA RKRYPLLRFE VGSMDALEVA DGTLHGIVSW YSIIHAPPRE
LPSYLTEFRR VLVRGGTLLL AFFESEGGPV EAFDHKVVTA YRWPIDDLAD LAGEAGFEEI
GRVLRQPLAE ERYRRGHLLL RAR