Gene Svir_28390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28390 
Symbol 
ID8388163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3082255 
End bp3082989 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content66% 
IMG OID644976870 
Productacetyltransferase (isoleucine patch superfamily) 
Protein accessionYP_003134647 
Protein GI257056815 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGTCGC GGGTGCAGGC ATGGCGCCGG GCCCGGCGTG ATCCTCGACA GGCACGGTTT 
CTCACGGTCG AGTCGTTGCG CTGGGTATGG CGCAATCGTG CCTTCACGCC GTGGTACCTG
GTGCGCTACT GGCGGCTGCT CAAGTTCCGG ATCGCCAATC CACACATCAT CCTGCGCGGG
ATGGTGTTCC TCGGACGGGA CGTGGAGATC CACTGCCGTC CCGGCTACGG CCGGATGGAG
ATCGGACGTT GGGTGCACAT CGGTGACGGC AACGCCATCC GTTGCCACGA GGGCTCACTG
CGTATCGGCG ACAAGGTGGT GTTCGGCCGC CAGAACGTGG TCAACGGCTA TCTCGACATC
GAGATCGGCG CGGCCACCCT CGTCGCCGAC TGGGTCTACA TCTGCGACTT CGACCATGTG
ACGTCGGACA TCACCGTGCC CATCAAGGAT CAGGGCATCG TGAAGTCCCC GGTGCGGATC
GGTCCCGACA CGTGGATCGG CACCAAGGTG TCGGTGCTGC GGGGAACCCG CGTGGGACGG
GGCTGTGTGC TGGGGGCCCA CGCCGTCGTG CGTGGTGACA TCCCCGACTA CGGCATCGCG
GTCGGGGCGC CGGCGCGTGT GGTGCGGGAC CGCAAGGCCG ACTACGAGGC CGACGCCGAA
CGCCGCGAGG CCATCAAGGA CATGGCCCGC AAGGCGAACA AGGCGTTGAA GAAGACCCTC
GGCGAAGCCA CTTAA
 
Protein sequence
MLSRVQAWRR ARRDPRQARF LTVESLRWVW RNRAFTPWYL VRYWRLLKFR IANPHIILRG 
MVFLGRDVEI HCRPGYGRME IGRWVHIGDG NAIRCHEGSL RIGDKVVFGR QNVVNGYLDI
EIGAATLVAD WVYICDFDHV TSDITVPIKD QGIVKSPVRI GPDTWIGTKV SVLRGTRVGR
GCVLGAHAVV RGDIPDYGIA VGAPARVVRD RKADYEADAE RREAIKDMAR KANKALKKTL
GEAT