| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28360 |
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| Symbol | |
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| ID | 8388160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3077526 |
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| End bp | 3078824 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976867 |
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| Product | isocitrate lyase |
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| Protein accession | YP_003134644 |
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| Protein GI | 257056812 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.721222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAGA CCCAGAAGAC CCAGTCGGCT CGCTTGGAGC AGGAAGCGGC GGCCCTGGAG
CAGGAGTGGA AGACCAACCC CCGCTGGCGT GGTGTGAAGC GGTCCTACTC CGCGGCGGAC
GTCGTCAGGC TGCGGGGCAG CGTGGTCGAG GAGCACACCC TCGCCCGGCG CGGTGCCGAG
AAGCTGTGGA ATCTGCTCCA CACCGAGGAC TACGTCCACG CGCTGGGTGC CCTCACGGGC
AACCAGGCCG TGCAGCAGGT CCGCGCGGGC CTCAAGGCCA TCTACCTGTC GGGCTGGCAG
GTCGCGGCGG ACGCCAACCT GGCGGGCCAG ACCTACCCCG ACCAGAGCCT CTACCCGGCC
AACTCCGTTC CGGCCGTGGT GCGCCGCATC AACAACGCGC TGATGCGCGC CGACCAGATC
AGCTGGGCCG AAGGCAACAC CGACATCGAC TGGTTCGCGC CGATCGTCGC TGACGCCGAA
GCCGGTTTCG GCGGTCCGCT CAACGCGTTC GAGCTGATGA AGGGCATGAT CGCCGCGGGA
GCCGCGGGCG TGCACTGGGA GGACCAGCTC GCGTCCGAGA AGAAGTGCGG GCACCTCGGT
GGCAAGGTGC TCATCCCCAC CAAGCAGCAC GAGCGCACGC TGAACGCCGC GCGGTTGGCC
TCCGACGTGC TGAACGTGCC GTCGCTGATC GTCGCCCGCA CCGACGCTCA GGCCGCGACG
CTGCTCACCA GCGACGTCGA CGAGCGTGAC CGGAAGTTCC TCACCGGCAA GCGCACGTCC
GAGGGCTTCT ACGAGGTGCG CAACGGCATC GAACCGTGCA TCGAGCGTGG TCTGGCCTAC
GCCGAGTACG CCGACCTGCT GTGGATGGAG ACGTCCACTC CGGACCTCGA GGTCGCGCGC
CAGTTCGCCG AGGCGATCAA GGACAAGTAC CCGGACCAGA TGCTGGCCTA CAACTGCTCG
CCGTCGTTCA ACTGGAAGAA GCACCTGGAC GACGCGACCA TCGCGAAGTT CCAGCGCGAG
CTGGGCCACA TGGGTTACAA GTTCCAGTTC ATCACGCTGG CGGGCTTCCA CGCCCTGAAC
TACTCGATGT TCGACCTCGC CAAGGGCTAC GCCTCCGACG GTATGACCGC CTACGTCGAC
CTGCAGGAGC GCGAGTTCGC GGCCGAGGAG CGTGGCTACA CCGCCACCAA GCACCAGCGT
GAGGTCGGCA CCGGTTGGTT CGACCTGGTG AGCACCACCT TGAACCCGGA GAGCTCGACC
ACGGCATTGA CCGGCTCCAC TGAAGAAGAG CAGTTCTGA
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| Protein sequence | MAETQKTQSA RLEQEAAALE QEWKTNPRWR GVKRSYSAAD VVRLRGSVVE EHTLARRGAE
KLWNLLHTED YVHALGALTG NQAVQQVRAG LKAIYLSGWQ VAADANLAGQ TYPDQSLYPA
NSVPAVVRRI NNALMRADQI SWAEGNTDID WFAPIVADAE AGFGGPLNAF ELMKGMIAAG
AAGVHWEDQL ASEKKCGHLG GKVLIPTKQH ERTLNAARLA SDVLNVPSLI VARTDAQAAT
LLTSDVDERD RKFLTGKRTS EGFYEVRNGI EPCIERGLAY AEYADLLWME TSTPDLEVAR
QFAEAIKDKY PDQMLAYNCS PSFNWKKHLD DATIAKFQRE LGHMGYKFQF ITLAGFHALN
YSMFDLAKGY ASDGMTAYVD LQEREFAAEE RGYTATKHQR EVGTGWFDLV STTLNPESST
TALTGSTEEE QF
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