Gene Svir_28330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28330 
Symbol 
ID8388157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3074720 
End bp3075178 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content64% 
IMG OID644976864 
Producthypothetical protein 
Protein accessionYP_003134641 
Protein GI257056809 
COG category[S] Function unknown 
COG ID[COG3558] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0182368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCAC GCCCGCCGTT CCCGCCTTTC GACGAACACA CCGCCGCGCA CAAGGTCCAG 
CTGGCCGAGG ACGCCTGGAA CACCCGTGAC CCGGAACGGG TCGCGCTCGC TTACACCGAG
GACTCCGTGT GGCGCAACCG CGATCGACAC ATCGTCGGTC GGGAGCAGAT CATCGCGTTT
CTGACCGAGA AGTGGGAACG TGAACTTGAT TACGCGCTCC GGAAGGAGCT GTGGGGGTTC
CGGGGAAATC GCATCGCCGT ACGGTTCCAG TACGAAAGCC GCGATCACAC GGGACAGTGG
TGGCGCAGCT ACGGCAACGA GCTGTGGGAG TTCACCGAGG ACGGGCTGAT GTCCCGGCGT
GAGGCCAGCA TCAACGACTT TCCGATCGAC GCCTCCCAGC GTCGGATCTT CGGTCCGCGT
TCGGAGGAGG AGCACGGCCT GCTGCTGCCG GTGTTCTGA
 
Protein sequence
MTSRPPFPPF DEHTAAHKVQ LAEDAWNTRD PERVALAYTE DSVWRNRDRH IVGREQIIAF 
LTEKWERELD YALRKELWGF RGNRIAVRFQ YESRDHTGQW WRSYGNELWE FTEDGLMSRR
EASINDFPID ASQRRIFGPR SEEEHGLLLP VF