Gene Svir_28260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_28260 
Symbol 
ID8388150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3066131 
End bp3066916 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content67% 
IMG OID644976857 
Productelectron transfer flavoprotein, beta subunit 
Protein accessionYP_003134634 
Protein GI257056802 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACA TCGTTGTTCT GGTCAAGCAG GTGCCAGACA CCTACTCGGA GCGAAAGCTC 
AACGAGAACG ACCACACCCT CGACCGTGAA TCCGCCGACG CGGTGATCGA TGAGATCAAC
GAGCGCGCCG TCGAGGAGGC GCTCCAGATC AAGGAAGCCA ACGGGGGCGA GGTGACCGTC
CTGTGCGTCG GCCCCGACCG CGCCACCGAC GCGATCCGTA AGGCGCTGTC CATGGGTGCC
GACAAGGCGA TCCACGTCTC CGACGAGGCC TTGCGCGGAT CCGACATGCT GGCCACCGCG
AAGGTGCTGG CCGCGGCCGT GCGCAAGGTC GAGGGAGTCG ACCTGGTCAT CGCCGGTAAC
GAGGCCTCCG ACGGCCGCAG CGGTGCCGTG CCCGCGGTGC TGGCCGAACT GCTCGGCATG
CCGCAGCTCA CCCACGCCCG TTCCGTGACG GTCGAGGGCG ACACCATCAA GGTCGACCGT
GAGACCGAGG ACGGCATCAC CCACCTCGAG GCCAACCTGC CCGCCGTGGT CAGCGTGACC
GAGAAGATCA ACGAGCCGCG CTACCCGTCG TTCAAGGGCA TCATGGCCGC CAAGAAGAAG
CCGGTGGAGA CCCTGACCGT CGCCGACCTC GACGTCGACA CGGCCGAGCT CGGCCTCGCC
AACGCCGGGT CCACCGTCCT GGAGGCGACG CCGAAGCCGC CACGGACCGC CGGTGAGAAG
ATCACCGACG AAGGCGACGG TGGCACGAAG ATCGCCGAGT ACCTGGTGGC CCAGAAGATC
ATCTGA
 
Protein sequence
MTNIVVLVKQ VPDTYSERKL NENDHTLDRE SADAVIDEIN ERAVEEALQI KEANGGEVTV 
LCVGPDRATD AIRKALSMGA DKAIHVSDEA LRGSDMLATA KVLAAAVRKV EGVDLVIAGN
EASDGRSGAV PAVLAELLGM PQLTHARSVT VEGDTIKVDR ETEDGITHLE ANLPAVVSVT
EKINEPRYPS FKGIMAAKKK PVETLTVADL DVDTAELGLA NAGSTVLEAT PKPPRTAGEK
ITDEGDGGTK IAEYLVAQKI I