| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28100 |
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| Symbol | |
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| ID | 8388134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3049048 |
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| End bp | 3050268 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976841 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_003134618 |
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| Protein GI | 257056786 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.54821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.926175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTTG AGCAGCAACG CACCAAGCAC GACCCCGACG AGCGTGGGCG TTTCGGCCCG
TACGGGGGTC GTTATCTGCC CGAGGCCCTG ATGGGCGCGG TGGACGAACT CGCGGCCGAG
TACGACAAGG CGAGGTCGGA CCCGGAGTTC GCTCGGGAAC TCGATCGGCT GCTTACCGGG
TATGCGGGTA GGCCGTCGTT ACTCACCGAG GCTCCCCGGT TCGCCGAGCA CGCGGGTGGC
GCGCGCATCT TCCTCAAGCG CGAGGACCTC AACCACACCG GGTCCCACAA GATCAACAAC
GTGCTGGGTC AGGCCCTGCT CACCAAGCGC ATGGGCAAGA CCCGCGTGAT CGCCGAGACG
GGTGCCGGGC AGCACGGGGT GGCGACCGCC ACGGCGTGCG CGCTGCTCGA CCTCGACTGT
GTGGTCTACA TGGGTGAGGT CGACACGCAG CGACAGGCGC TCAACGTCGC GCGGATGCGG
TTGCTCGGTG CCGAGGTGGT GCCGGTACGG ACCGGGTCGC GCACGTTGAA GGACGCCATC
AACGAGGCGC TGCGCGACTG GGTGACCAAT GTGGACACCA CGCATTACCT GCTGGGCTCG
GTGACCGGTC CGCATCCGTT CCCGCTCATG GTGCGCAACT TCCACAAGGT CATCGGTGAG
GAGGCGCGCC GCCAGATCCT GGAACTGACC GGCCGGTTGC CCGACGCCGT CGCCGCGTGT
GTCGGCGGGG GTTCCAACGC CATCGGCATG TTCCACGGTT TCATCGACGA CCCGGACGTA
CGTCTGGTGG GCTTCGAACC GGGCGGTAAG GGGCTCGACT CCGGTGAGCA CGGCGCCACG
CTCACGCAGG GGACACCGGG GACGCTGCAC GGCGCGCTGT CGTACCTGTT GCAGGACGCC
GACGGCCAGA CCATCGAGGC GTACTCGATC TCGGCGGGCC TGGACTACCC GGGCGTCGGT
CCTGAGCACT CGTGGTTGAA GGACAGCGGC CGCGCCGAGT ACCGGCCCGT CACCGACGCC
GAGGCGATGG AAGCGTTCCG ACTGCTGTCC CGGACCGAGG GCATCATCCC CGCGATCGAG
TCGGCGCACG CGCTCGCGGG TGCCCTCCAG CTCGGTCGGG AACTCGGCCC CGATGCGCAC
ATCGTGGTCA GCCTGTCGGG TCGGGGGGAC AAGGACGTGG ACGCCGCCGC CCGATACTTC
AAGCTCGTGG AGGACGTGTG A
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| Protein sequence | MSVEQQRTKH DPDERGRFGP YGGRYLPEAL MGAVDELAAE YDKARSDPEF ARELDRLLTG
YAGRPSLLTE APRFAEHAGG ARIFLKREDL NHTGSHKINN VLGQALLTKR MGKTRVIAET
GAGQHGVATA TACALLDLDC VVYMGEVDTQ RQALNVARMR LLGAEVVPVR TGSRTLKDAI
NEALRDWVTN VDTTHYLLGS VTGPHPFPLM VRNFHKVIGE EARRQILELT GRLPDAVAAC
VGGGSNAIGM FHGFIDDPDV RLVGFEPGGK GLDSGEHGAT LTQGTPGTLH GALSYLLQDA
DGQTIEAYSI SAGLDYPGVG PEHSWLKDSG RAEYRPVTDA EAMEAFRLLS RTEGIIPAIE
SAHALAGALQ LGRELGPDAH IVVSLSGRGD KDVDAAARYF KLVEDV
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