| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27950 |
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| Symbol | |
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| ID | 8388119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3026837 |
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| End bp | 3029608 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644976826 |
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| Product | response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein |
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| Protein accession | YP_003134603 |
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| Protein GI | 257056771 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.81499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.031015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCCG TGTGGGATGA CACGCTCGCG CACCCGGTGC GTGGGCGGGA TCGTGAACTC
GCGACTTTGA CCGGGCTTCT CGACAACACC TCCGGCCGAA GAGGCACCGG AATGGTTGTC
GTGGGGGCCC CGGGGACGGG CAAGACCACC CTGCTCAACG CGCTCGTCGA ACACGCCGAA
GGGTTCCAAG TCCTGTGGGC CGAGGGCAGC GCGGCCGAGT CCGATGTCCG TTTCGCCGGT
GTCGAGCAGT TGTTGAGACC GCTCGAGTCC TTGGTGTCAC TCCTGCCGGA TGACCGTGGC
CGCGCATTGC GACCGGTATG GGGACTGCCC GCCGACGATG AGGGACAGGT CGGTTCACTC
GCGGTACCGG CGGCCGTCTC CGCGCTGCTC GGCCTGGCCG CTCGTCGACA GCCCGTCCTG
TGCTGTGTCG ATTCGGCCCA CCTGTTGGAC AGCGCGTCCC TGTCCGCTCT CGCCTTCGCC
GCACGCCGCG CTCACCACGC CGGTGTGGTC TTCGTGTTCG CCGTCGACTG TACGGCCGAC
ACCGAGGTGG ACACGGAGAC GTCGGTGTGG GGCGAACTTC CTCGGTTACG GCTCGGCCGG
CTGGACGACG AGGCCGCGCA CGCGCTGTTG CGTGACCGGC TCGGCGCGTC CCTGCCGCAC
GACCTCGCCG ATTCCCTGCT CGACGTCGGA CACGGCAATC CCCTCGCCCT GGTCGAACTC
GCCGAGAGTC TGACACCGGA GCACCTGTGC GGAAGGGCGG CTCCGCCTTC GTCCCCGCCT
CCCGAGGGGA GGCTGTGCCG TACGCTCGGA CACCGGCTGT CGGCTCTGTC CGAGGGAGCA
CGCGAGGTGG TGGCGCTCGC CGGGATATCC GAGGGATTGG ACGAACAGCT CACCTGTCGG
GTGCTGCCCC ATCACAGGTC GACGCTGGCC GAGGCCGTCC GCTCGGGGCT GGTGGTCCTC
GACGGCGACA CGGTCCGGAC CGCGGCGGAC ACCGTGCCCT CCGCACTGCT CGCGGCCTTG
ACCCCGCAGG ACATCGTCCA AGCGCACCAC CGCATGGCCG AGGCCGCGGA GGCGGTCGGA
GACCGGGACC GCGCCGTGTG GCATCGGGCG GCGATCGCCA TGGCCCCCGA TCCGGCTCTC
GTGGCGGACC TGGACGACAT CGCGGAGCGC GCCCGCGCCG CGGCGGCCCA CGCCACGGCC
GCAGCGGCGA GTGAACGAGC GGCGGCCCTG ACCTCGGACA CGAAGGAACG CGCCCGCCGT
CTCGTGGCGG CGGCCACGGA CCACTGGGCT TCGGGGCGTC CGCAGCGAGC GCGCACCGCG
TTGCGGCTCG CCGCCCCACT CTCCGACAGC GTTCTGGGCG CGCGGGTCAG CAGGCTGGCG
GGTGAGATCG AACTGCGCCG GGGTGACCCC TCCGTGGCCG CTACCAAACT CATCTCCACC
GCACGACAGC TGGCGTCCAC GCATCGCACG CTCGCCGCGA GCGCACTCAT GTTGGCCGGT
GAGGCGAGTT TCGTGGCGGG GGACAACGCG CGGTACTGCC TCACCGCGAA GGACGCCGCC
CTCCTCTGCG GCCCGGAGGA ATGGCCGGCC ACGCGGGTGG TGCGCGAGCA CTTCACCGCC
ATGTCGGCGA CCTTCCGAGG GGAGCACAGT GCCGCGGCGG CGCCGCTGCG CAGCCTCGTC
GAACTCGGCG AGACGACGCC CGATCCGACC GCGAAGACCC TCGCGAGCCA GGCCGCCTTC
ACCCTCGGCG ACGCCGAACG ATCCCGGGAC CTCGCGCTCC AGGCCGTCGT GTGCGCCCGT
GCCCGCGGCG ACGAGTCGGG GGTGCCGTGG GCCTTGGTGT ACGCGGCGTT GTCGGCGTTG
TTGTCCGGGC AACTCTCCGC CGCGTCCACC ACCGCGTTGG AGGGACTTCA GGTGGCGCGT
TCGTTGGGGC AGTCCAATTC GGCCGTCGAT CATGTCACCG TGCTCGCCAT GTTGGCCGCG
TTGCAGGGCG ATGAGGAAAC CGCCCTGCAA CGGCTGCAAG CCGCGAACAC GGAGCTCGCC
GAACGTGGAC TGGGCCGTCC GAGCGCACTG GCGACCTGGG CGGCTGCCTG TGTGGACCTC
GCCCATGACC GGCCCGCCGA GGCCTTCGAT CGATTCCGCA GGATGACGGT GGGCCGATCC
CGCCACTGCG TGCCGCTTCG GGTGATGGCG GTGCCGCATT TCGTCGAGGC CGCCGTGCGG
TGCGGGGAGA AGGAGGTGGC CCGACGTTCC CTGGTGACGT TCGAGCACTG GGCCAACACC
ACGGGAGGCA CCGCTCGGGT CGCCTTGGCC CATCGCTGCC ATGCGTTGCT CGCCGAGCAG
GACGGTGAAG CGCAGGAGCG GTTCACCGAG GCGGTCCGCT TGCACCGCGA GGCCGACGCA
CCTTACGACC TGGCTGTCAC CCAGCTGCTG TACGCCTCCC ACCTGCGGCG CTCCCGCAGG
CCCAAACAGG CCCGGGAACT GCTGCGGGAA GCCGTCCAGT TGTTCGACGA CCTCGGTGCC
ACGCACTGGG TGGAGCGGGC CTCGCAGGAA CTGCGTGCCT GCGGCCACCC GGGACGGGGC
AAACCCCACC TGTCCCGGGG GTTGAGTCCA CAGCAGGAAC GCATCGCGCA GCTTGTGGCC
GACGGCGCCA CGAACAAGGA GATCGCCACG CAACTGTTCA TCAGTCATCG CACGGTGGAT
CACCATCTGC GCAACATCTT CGCCAAGCTC GACGTGCGTT CCCGCGTGCA GCTGGCGGCC
CTCTTCCGGT GA
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| Protein sequence | MLAVWDDTLA HPVRGRDREL ATLTGLLDNT SGRRGTGMVV VGAPGTGKTT LLNALVEHAE
GFQVLWAEGS AAESDVRFAG VEQLLRPLES LVSLLPDDRG RALRPVWGLP ADDEGQVGSL
AVPAAVSALL GLAARRQPVL CCVDSAHLLD SASLSALAFA ARRAHHAGVV FVFAVDCTAD
TEVDTETSVW GELPRLRLGR LDDEAAHALL RDRLGASLPH DLADSLLDVG HGNPLALVEL
AESLTPEHLC GRAAPPSSPP PEGRLCRTLG HRLSALSEGA REVVALAGIS EGLDEQLTCR
VLPHHRSTLA EAVRSGLVVL DGDTVRTAAD TVPSALLAAL TPQDIVQAHH RMAEAAEAVG
DRDRAVWHRA AIAMAPDPAL VADLDDIAER ARAAAAHATA AAASERAAAL TSDTKERARR
LVAAATDHWA SGRPQRARTA LRLAAPLSDS VLGARVSRLA GEIELRRGDP SVAATKLIST
ARQLASTHRT LAASALMLAG EASFVAGDNA RYCLTAKDAA LLCGPEEWPA TRVVREHFTA
MSATFRGEHS AAAAPLRSLV ELGETTPDPT AKTLASQAAF TLGDAERSRD LALQAVVCAR
ARGDESGVPW ALVYAALSAL LSGQLSAAST TALEGLQVAR SLGQSNSAVD HVTVLAMLAA
LQGDEETALQ RLQAANTELA ERGLGRPSAL ATWAAACVDL AHDRPAEAFD RFRRMTVGRS
RHCVPLRVMA VPHFVEAAVR CGEKEVARRS LVTFEHWANT TGGTARVALA HRCHALLAEQ
DGEAQERFTE AVRLHREADA PYDLAVTQLL YASHLRRSRR PKQARELLRE AVQLFDDLGA
THWVERASQE LRACGHPGRG KPHLSRGLSP QQERIAQLVA DGATNKEIAT QLFISHRTVD
HHLRNIFAKL DVRSRVQLAA LFR
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