| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27750 |
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| Symbol | sdhA |
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| ID | 8388099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3000509 |
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| End bp | 3002425 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644976806 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_003134583 |
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| Protein GI | 257056751 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0951337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGG TCGAGCGGCA CAGCTACGAC GTCGTGGTGA TCGGCGCCGG CGGGGCGGGG
CTGCGGGCGG TGATCGAGGC ACGCCAGCGG GGGCTTTCCG TCGCGGTGGT GTCCAAATCG
TTGTTCGGCA AGGCGCACAC CGTCATGGCC GAAGGCGGCT GTGCGGCGTC GATGGGCAAC
GTGAACCCCA ACGACGGCTG GCAGGTGCAC TTCCGCGACA CCATGCGGGG CGGCAAGTTC
CTCAACGACT GGCGCATGGC GGAACTGCAC GCAAAGGAAG CCCCCGACCG GGTGTGGGAG
CTGGAGACGT ACGGTGCGTT GTTCGATCGC ACTCCGGACG GGCGGATCAG TCAACGTAAC
TTCGGCGGAC ACACGTATCC GCGGCTCGCA CACGTCGGGG ACCGGACCGG ACTCGAATTG
ATCCGCACGA TGCAGCAGAA GATCGTGTCG CTGCAGCAGG AGGATTACGC CGCCCACGGC
GACTACGAAG CCAAGCTCAA GGTGTTCGAC GAATGCACGA TCACCGAGTT GTTGACCCAG
GACGGCGCGA TCGCGGGCGC GTTCGGTTAC TGGCGTGAGT CCGGCCGGTT CGTGCTGTTC
GAAGCACCGG CCGTCATCCT CGCCACCGGC GGTATCGGCA AGTCGTTCCA GGTGACGTCG
AACTCGTGGG AATACACGGG TGACGGTCAC GCGCTCGCGC TGCGGGCCGG TGCCACGTTG
ATCAACATGG AGTTCGTGCA GTTCCATCCC ACCGGGATGG TCTGGCCGCC GAGTGTGAAA
GGCATCCTCG TCACCGAAGG CGTGCGTGGG GACGGCGGTG TGCTCCGCAA CTCCGAGGGC
GAGCGGTTCA TGTTCCGCTA CATCCCGGAC GTGTTCAAGG GGCAGTACGC GGAGACGGAA
GAGGAAGCCG ATCGCTGGTA CGAAGACCCT GACAACAATC GCCGCACCCC TGATCTGCTC
CCTCGGGACG AGGTGGCGCG GGCGATCAAC ACCGAGGTGA AGGAGGGACG GGGATCACCG
CATGGCGGTG TGTTCCTCGA CATCGCGAGT CGGCTGCCCG CCGAGGAGAT CAAACGGCGC
TTGCCTTCGA TGTACCACCA GTTCAAGGAA CTGGCCGACG TGGACATCAC GGCCGAACCG
ATGGAGGTCG GTCCGACGTG CCACTACGTG ATGGGTGGCA TCGAGGTCGA TCCGGACACC
GCGGCCTCGA GTGTGCCCGG CCTGTTCGCG GCGGGGGAAT GCGCGGGCGG CATGCACGGG
TCCAACCGGC TCGGTGGCAA TTCGCTCTCG GACCTGCTGG TGTTCGGACG GAGGGCGGGG
ATCGGCGCTG CGGACTACGT CGATTCGCTC ACCAGTCGAC CCACTGTGTC CGCAGTGGAC
TTGGCCATGG CCGCGAGGAC GGCTTTGGCG CCGTTCGACC CACCGCGGGA CGGACAGGCG
GCGGAGAACC CCTACTCGCT GCAGACCGAA TTGCAGCAGT GCATGAACGA TCTCGTGGGC
ATCATCCGGA CGGCCTCGGA GATGGAGCAG GCCCTGGAGA AGCTCGACGA GATCCGAGAG
CGGCTCCGGG CGGTGACGGT GGAGGGGCAC CGACAGTACA ACCCGGGCTG GCACCTGGCG
TTGGATCTTC GAAACATGCT GCTGGTGAGC GAGTGCGTGG CGCGTTCGGC GTTGCGACGC
ACCGAGAGCA GGGGTGGACA CACACGTGAC GACTACCCGC AGATGGACGC GAACTGGCGC
AAGGTGCTGC TCGTGTGTTC GGCCACTGAT CGTGAAGCGC CGCTTCCGCG TATCGAGGTG
ACCACGAAGG AGCAGAAGCC GATGCGGGAC GACCTGTTCG CCCTGTTCGA GCTCTCCGAA
CTGGAGAAGT ACTACACCGA CGAGGAACTG GCCGAGCATC CGGAAAGGAC GGCCTGA
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| Protein sequence | MTEVERHSYD VVVIGAGGAG LRAVIEARQR GLSVAVVSKS LFGKAHTVMA EGGCAASMGN
VNPNDGWQVH FRDTMRGGKF LNDWRMAELH AKEAPDRVWE LETYGALFDR TPDGRISQRN
FGGHTYPRLA HVGDRTGLEL IRTMQQKIVS LQQEDYAAHG DYEAKLKVFD ECTITELLTQ
DGAIAGAFGY WRESGRFVLF EAPAVILATG GIGKSFQVTS NSWEYTGDGH ALALRAGATL
INMEFVQFHP TGMVWPPSVK GILVTEGVRG DGGVLRNSEG ERFMFRYIPD VFKGQYAETE
EEADRWYEDP DNNRRTPDLL PRDEVARAIN TEVKEGRGSP HGGVFLDIAS RLPAEEIKRR
LPSMYHQFKE LADVDITAEP MEVGPTCHYV MGGIEVDPDT AASSVPGLFA AGECAGGMHG
SNRLGGNSLS DLLVFGRRAG IGAADYVDSL TSRPTVSAVD LAMAARTALA PFDPPRDGQA
AENPYSLQTE LQQCMNDLVG IIRTASEMEQ ALEKLDEIRE RLRAVTVEGH RQYNPGWHLA
LDLRNMLLVS ECVARSALRR TESRGGHTRD DYPQMDANWR KVLLVCSATD REAPLPRIEV
TTKEQKPMRD DLFALFELSE LEKYYTDEEL AEHPERTA
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