| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27570 |
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| Symbol | |
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| ID | 8388081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2980633 |
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| End bp | 2983500 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644976788 |
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| Product | vitamin B12-dependent ribonucleotide reductase |
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| Protein accession | YP_003134565 |
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| Protein GI | 257056733 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.368916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGTCG GCGCGGAATC CTCGCCGAAA CCGAGCAAGA AGCGGGGTAG CTCGGGCGCG
CGTAAGGGCC TGCGCATCCA GCGCGTCTTC ACGACCGAGG GCGTGCACCC CTACGACGAG
GTGCGATGGG AGAAGCGCGA TGTCGTCATG ACCAACTGGC GTGACGGCAC GGTGAACTTC
GAGCAACGTG GTGTGGAGTT CCCCGACTTC TGGTCGCTCA ACGCGACGAA CATCGTCACC
AGCAAGTACT TCCGTGGGGC GGTTGGCAGT CCCGAACGGG AAAGCAGCCT GAAGCAGCTC
ATCGACCGCG TCGTCAAGAC TTACGTCAAG GCGGGGCTCG AACACGGTTA CTTCGCCGGT
GCCGCCGACG CCGAGATCTT CGAGCACGAG CTGACATGGA TGCTGCTGCA CCAGGTGTTC
AGCTTCAACT CGCCGGTGTG GTTCAACGTC GGTACCAGTT CGAAGCAGCA GGTCAGCGCC
TGCTTCATCC TGTCGGTCGA CGACACCATG GAATCGATCC TCAACTGGTA CAAGGAAGAG
GGTCTGATCT TCAAAGGCGG TTCGGGCGCG GGCCTGAACC TGTCGCGCAT CCGTTCGTCG
CGGGAACTGT TGTCCTCCGG CGGGACGGCT TCGGGACCGG TGTCGTTCAT GCGGGGCGCC
GACGCGTCCG CGGGCACCAT CAAGTCGGGT GGGGCCACGC GTCGTGCGGC GAAGATGGTG
GTTCTCGACG TCGACCACCC CGACGTCGAG GAATTCATCG AGACCAAGGC GCGGGAGGAG
CACAAGATCC GGGCGCTCCG GGACGCCGGT TTCGACATGG ACCTCGGCGG CGCCGACATC
TCGTCGGTGC AGTACCAGAA CGCCAACAAC TCCGTGCGTG TCTCCGACGA GTTCATGCAG
GCCGTCGAGA CCGGAGGTGA CTTCGGGCTG CGCGCCAGGA CGACCGGGGA GATCATCGAG
CGGGTCGACG CGAGGTCGCT GTTCCGCAAG ATGGCCCAGG CCGCGTGGGA ATGCGCCGAT
CCCGGCATCC AGTACGACGA CACGATCAAC GATTGGCACA CCTGCCCGGA GTCGGGGCGT
ATCACCGCCT CGAACCCGTG CTCGGAGTAC ATGCACCTGG ACAACTCCAG CTGTAACCTC
GCCTCGCTGA ACCTGCTGAA GTTCCTGCGT GACGACGGCA CGTTCGACGC GGAACTGTTC
GTCAAGGCGG TCGAGCTCGT CATCACGGCG ATGGACATCT CGATCTGCTT CGCCGACTTC
CCGACCGAGG CCATCGCGGA GACCACGCGG AAGTTCCGCC AGCTGGGGAT CGGCTACGCC
AACCTCGGTG CGCTGCTGAT GGCCACGGGA CACGCGTACG ACTCCGAGGG TGGGCGTGCG
CTGGCCGCGG CGATCACCTC GCTGATGACG GCCGTGTCCT ACCGACGGTC GGCGGAGTTG
GCCGGGATCG TGGGCCCCTA CGAGGGGTAC GCCCGGAACG CCGAGGCGCA CCAGCGCGTG
ATGCGCAAGC ACGCGGCGGC CAACGAACTC GTCCGCACCT ACCACGTCAA CGACGCCGCG
ATCAGGGCGG TGGCGACCAA GGAGTGGAAC CGGGGCATCG AGCTCGGCAT GGCCAACGGT
TGGCGTAACT CGCAGGCCAG CGTGTTGGCC CCCACCGGGA CCATCGGTTT CATGATGGAC
TGCGACACCA CCGGGATCGA GCCGGACTTC TCGTTGGTGA AGTTCAAGAA GCTCGTCGGC
GGCGGATCCA TGAAGATCGT CAACAACGCG GTCCCCCGCG CGCTGCGCTC CCTGGGCTAC
CAGGAGGAGC AGATCGAGGC GATCGTCGAC TACATCTCCG AGCACGGCCA TGTGGTCAAC
GCGCCGGGGC TGCGGCCCGA ACACTACGAA GTGTTCGACT GTGCGGTGGG AGAGCGGTCG
ATCGCGCCGA TGGGCCACGT GCGGATGATG GCGGCGGTGC AGCCTTTCCT GTCCGGCGCG
ATCTCCAAGA CGGTCAACAT GCCGGAGTCG GCCACCGTCG AGGACGTGGA GGAGATCTAC
TTCCAGGGCT GGAAGTTGGG TCTTAAGGCA TTGGCCATCT ACCGCGACAA CTGCAAGGTG
GGCCAGCCGC TGTCGACGGC GAAGAAGGAG AAGTCCGAAA GCAGGGCGGA ACCCGAGAAG
GTGGTCGAGT ACCGCCCGGT GCGGAAGCGG CTGCCGAAGA AGCGGCCGAG CCAGACGGTT
TCGTTCACCG TGGGCGGCGC CGAAGGGTAC ATGATCGCCG GTTCGTATCC GGACGACGGC
AAACTCGGCG AGATCTTCGT CAAGCTGGGT AAGCAGGGGT CCACCCTGGC CGGCGTGATG
GACGCCTTCT CCATGTCGAT CTCGGTGGGG CTGCAGTACG GCATTCCGCT CGAGTTCTAC
GTGCAGAAGT TCCAGAACCT GCGCTTCGAG CCGGCGGGGA TGACCGACGA CCCGGACATC
CGCATGGCGA CGAGTGTCCT GGACTACTTG TTCCGCAGGC TCGCGCTGGA CTATCTGCCG
TATGAGAAGC GTGCGCAACT GGGCATCTTC ACCGCCGACG AGCGCGCGGC ACAGGTCGAG
AACGATTACG GTTCGTCGGC GGAACCCAAC GTCGATCTGG AAGCCCTGCG CAGCAGCGTC
GAGACGGAGC AGCAGCGGGT CGAGGGCAGC GGTTCCGACT CCGACGACTC CGAGGAACGG
CCGTCGAGCG AAGCGCGTCG GGAAGCGCAC ACGACCCCCG AGTTGGTGGA GTTGCAGCTC
GGTAAGGCGG CTGACGCGCC GCTGTGCATG ACGTGCGGTA CGAAGATGCG TCCTGCGGGT
TCGTGCTACG TGTGTGAGGG CTGTGGCGCC ACCTCTGGCT GCAGCTGA
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| Protein sequence | MGVGAESSPK PSKKRGSSGA RKGLRIQRVF TTEGVHPYDE VRWEKRDVVM TNWRDGTVNF
EQRGVEFPDF WSLNATNIVT SKYFRGAVGS PERESSLKQL IDRVVKTYVK AGLEHGYFAG
AADAEIFEHE LTWMLLHQVF SFNSPVWFNV GTSSKQQVSA CFILSVDDTM ESILNWYKEE
GLIFKGGSGA GLNLSRIRSS RELLSSGGTA SGPVSFMRGA DASAGTIKSG GATRRAAKMV
VLDVDHPDVE EFIETKAREE HKIRALRDAG FDMDLGGADI SSVQYQNANN SVRVSDEFMQ
AVETGGDFGL RARTTGEIIE RVDARSLFRK MAQAAWECAD PGIQYDDTIN DWHTCPESGR
ITASNPCSEY MHLDNSSCNL ASLNLLKFLR DDGTFDAELF VKAVELVITA MDISICFADF
PTEAIAETTR KFRQLGIGYA NLGALLMATG HAYDSEGGRA LAAAITSLMT AVSYRRSAEL
AGIVGPYEGY ARNAEAHQRV MRKHAAANEL VRTYHVNDAA IRAVATKEWN RGIELGMANG
WRNSQASVLA PTGTIGFMMD CDTTGIEPDF SLVKFKKLVG GGSMKIVNNA VPRALRSLGY
QEEQIEAIVD YISEHGHVVN APGLRPEHYE VFDCAVGERS IAPMGHVRMM AAVQPFLSGA
ISKTVNMPES ATVEDVEEIY FQGWKLGLKA LAIYRDNCKV GQPLSTAKKE KSESRAEPEK
VVEYRPVRKR LPKKRPSQTV SFTVGGAEGY MIAGSYPDDG KLGEIFVKLG KQGSTLAGVM
DAFSMSISVG LQYGIPLEFY VQKFQNLRFE PAGMTDDPDI RMATSVLDYL FRRLALDYLP
YEKRAQLGIF TADERAAQVE NDYGSSAEPN VDLEALRSSV ETEQQRVEGS GSDSDDSEER
PSSEARREAH TTPELVELQL GKAADAPLCM TCGTKMRPAG SCYVCEGCGA TSGCS
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