| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27430 |
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| Symbol | |
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| ID | 8388067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2960105 |
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| End bp | 2961481 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644976774 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_003134551 |
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| Protein GI | 257056719 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.1992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCG CCGGGGTCGC CGTGTGTGTC GCGGGCGCCG GGGTGACCGG CCGTTCGGTG
GCCACCGCGC TCGTCGGGAT GGGGGCGCAG GTCACCGTCA CCGATGCCAA CGCCGAGCGG
CTCGCCGAAC TCGGCGACCT CGGCGTCCGG CTCGTCCCCG GCCTCGATAC ACCCCCGGAT
GGGACGCGGC TCGTGGTCAC CAGTCCCGGC TGGCGTCCCA CCGCTCCGCT GTTGACCGCG
GCGGCGTCGT CGGGCATCGA GGTCATCGGT GACGTGGAGC TGGCGTGGCG GATCGGACAG
GAGCGTCCGA ACCCGCCCAC GTGGCTCGCG GTGACAGGGA CGAACGGTAA GACCACCACG
GTCGGCATGG CGGAATCGAT GTTGCGCTCC GCGGGGGTCG ACGCCGTGGC GTGCGGCAAC
GTCGGTTTCG CCGTGCTCGA CGCTGTACTG GCTGGACATT CCACATTGGT CGTGGAGCTG
TCGAGTTTCC AGCTGCACTG GTCGCGCTCC CTCGCTCCCT CGGCGTCGGT GGTGCTCAAC
GTCGCCGAGG ACCATCTCGA CTGGCACGGC GGGCTCGCCG AGTACGCGGC GGACAAGGGC
ACGATCCATC GAGGTTCCGG GACCGTCGTG GCCAACCTGC GCGACCCGTG GTCCCGCAAA
CTCGCAGAGG AGCACGCACC GCCGGAGGCC CGCAGGGTCG GATTCACCCT GGACACACCG
AGGCCCGGTG AACTCGGTGT CGTGGAGGAC CTGCTCGTCG ACCGGGCGTT CGTGGCCGAT
CCCGTGCATG CGGCCGAGGA ACTGGGTACG TTGGCCGACG TCCGTCCCGG TGGGCCGCAC
AATGTGGCCA ACGCGCTGGC GGCGGCCGCG CTCGTGCGGG CGTACGGGGT GGGCCCCGAA
GCGGTGGCCG AGGGACTGCG TTCGTTCCGC CCCGGCGCAC ACCGGGCCGT GGAAGTCGGC
GAGTTCGACG GCGTGCGCTA CATCGACGAT TCGAAGGCGA CCAACCCGCA TGCCGCGATC
GGATCGCTGC TGGCTCATCC CAGCGTGGTC TGGATCGCGG GCGGACAGCT CAAGGGTGCG
TCCGTGGACG AACTGGTCGC GGCCGTCGCA GAGCGGCTGC GGGGAGTGGT GCTGCTGGGG
GCGGACGCCG ATGTCTTCGC CGAGGCTCTC GCGCGACACG CCCCGGATGT CCTGGTCCGA
CGCATCGGTT CGGGTGACGA TGAACCCATG ACTGCGGCGG TGAAGGCGGC GCGTGAACTG
GCGCGCCCGG GAGATGCTGT GTTGCTCGCG CCCGCTGCGG CGTCGCTGGA CATGTTCCGT
GACTACGCCG AGCGGGGCGA GGCGTTCGCG GCGGCGGTCG ACGAGCTATC GCGGTGA
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| Protein sequence | MDLAGVAVCV AGAGVTGRSV ATALVGMGAQ VTVTDANAER LAELGDLGVR LVPGLDTPPD
GTRLVVTSPG WRPTAPLLTA AASSGIEVIG DVELAWRIGQ ERPNPPTWLA VTGTNGKTTT
VGMAESMLRS AGVDAVACGN VGFAVLDAVL AGHSTLVVEL SSFQLHWSRS LAPSASVVLN
VAEDHLDWHG GLAEYAADKG TIHRGSGTVV ANLRDPWSRK LAEEHAPPEA RRVGFTLDTP
RPGELGVVED LLVDRAFVAD PVHAAEELGT LADVRPGGPH NVANALAAAA LVRAYGVGPE
AVAEGLRSFR PGAHRAVEVG EFDGVRYIDD SKATNPHAAI GSLLAHPSVV WIAGGQLKGA
SVDELVAAVA ERLRGVVLLG ADADVFAEAL ARHAPDVLVR RIGSGDDEPM TAAVKAAREL
ARPGDAVLLA PAAASLDMFR DYAERGEAFA AAVDELSR
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