Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_27340 |
Symbol | |
ID | 8388058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2950691 |
End bp | 2951323 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644976765 |
Product | hypothetical protein |
Protein accession | YP_003134542 |
Protein GI | 257056710 |
COG category | [S] Function unknown |
COG ID | [COG1799] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC TGCAGAAGCT GAAGGCCTAC TTCGGGATGG TCCCTGCCGA GGACGACTAC GACTTCGACG AGGACTATCG GCGCGACTAC CAGGGCAGCG ACTACGGTTC CTACGACGAG CACGCGTACA AGGAAACACA ACCGCGCAGG TCTCGCCCTC GCTACCGTGT CATGGACGAG TTCGAGGAAG CTGAGAGCAC GTCCACGCGT GCCCGGCGTT CGGCTTCGCG TGGGGAGCCC GCCGTGCACG GGTCGCTGGC CATGGATCGG CAGCCGGAGC CCATGGCGCG GGTGCGTCAG CTGGGGCAGC AGAACCCGGC CTCGGAGTCC GGTGCCGCGG TGGCGCGCGA TCCGTTGAGC CGCATCATCA CGTTGCACCC GACCAGTTAT GCGGAGGCGC GGGAGATCGG TGAGGCGTAC CGCGATGGGG CGCCTGTCAT CATGAACCTG ACGGAGATGG AGAACGCCGA CGCCAAACGT CTGGTGGACT TCGCGGCCGG TCTGGCGTTC GCCTTGCGCG GCTCGATGGA CAAGGTCACG AATAAAGTGT TTTTGCTCTC ACCCCCGGAT GTGGATGTGA CGGCGGAAGA CCGCAGGAGA ATCGCCGAGG GCGGATTGTT CCTCCGACAC TGA
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Protein sequence | MSALQKLKAY FGMVPAEDDY DFDEDYRRDY QGSDYGSYDE HAYKETQPRR SRPRYRVMDE FEEAESTSTR ARRSASRGEP AVHGSLAMDR QPEPMARVRQ LGQQNPASES GAAVARDPLS RIITLHPTSY AEAREIGEAY RDGAPVIMNL TEMENADAKR LVDFAAGLAF ALRGSMDKVT NKVFLLSPPD VDVTAEDRRR IAEGGLFLRH
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