Gene Svir_27340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_27340 
Symbol 
ID8388058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2950691 
End bp2951323 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID644976765 
Producthypothetical protein 
Protein accessionYP_003134542 
Protein GI257056710 
COG category[S] Function unknown 
COG ID[COG1799] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC TGCAGAAGCT GAAGGCCTAC TTCGGGATGG TCCCTGCCGA GGACGACTAC 
GACTTCGACG AGGACTATCG GCGCGACTAC CAGGGCAGCG ACTACGGTTC CTACGACGAG
CACGCGTACA AGGAAACACA ACCGCGCAGG TCTCGCCCTC GCTACCGTGT CATGGACGAG
TTCGAGGAAG CTGAGAGCAC GTCCACGCGT GCCCGGCGTT CGGCTTCGCG TGGGGAGCCC
GCCGTGCACG GGTCGCTGGC CATGGATCGG CAGCCGGAGC CCATGGCGCG GGTGCGTCAG
CTGGGGCAGC AGAACCCGGC CTCGGAGTCC GGTGCCGCGG TGGCGCGCGA TCCGTTGAGC
CGCATCATCA CGTTGCACCC GACCAGTTAT GCGGAGGCGC GGGAGATCGG TGAGGCGTAC
CGCGATGGGG CGCCTGTCAT CATGAACCTG ACGGAGATGG AGAACGCCGA CGCCAAACGT
CTGGTGGACT TCGCGGCCGG TCTGGCGTTC GCCTTGCGCG GCTCGATGGA CAAGGTCACG
AATAAAGTGT TTTTGCTCTC ACCCCCGGAT GTGGATGTGA CGGCGGAAGA CCGCAGGAGA
ATCGCCGAGG GCGGATTGTT CCTCCGACAC TGA
 
Protein sequence
MSALQKLKAY FGMVPAEDDY DFDEDYRRDY QGSDYGSYDE HAYKETQPRR SRPRYRVMDE 
FEEAESTSTR ARRSASRGEP AVHGSLAMDR QPEPMARVRQ LGQQNPASES GAAVARDPLS
RIITLHPTSY AEAREIGEAY RDGAPVIMNL TEMENADAKR LVDFAAGLAF ALRGSMDKVT
NKVFLLSPPD VDVTAEDRRR IAEGGLFLRH