| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27280 |
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| Symbol | |
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| ID | 8388052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2943911 |
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| End bp | 2944534 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976759 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_003134536 |
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| Protein GI | 257056704 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.097176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.384801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAACACCG AGCAACAGCC TGATCCCTCG GACACCGAGC AGTCCGCCGA TCCCACCCCG
GCCCGGCGGC GGGTGGGTCT GCTCGTCCTC GTCGCGGCGG TCGCCTACGT CGTGGACGTG
GTGACCAAGG TGGTCGCCAC GGCGACCCTG GAAGGCGAGG AGCCGATCCG CCTCCTGGGT
GGGGCGGTGT ACCTGCAACT GCTGCGCAAC CCGTACGCGG CCTTCGGCAT GGACATCGGC
GGTACCTGGA TACTCACCGT CGTGGCGATC GCCGTCGTCG TCGGCATCGC GTGGTTCGCG
CGCAAACTGC GCTCCGCGGG ATGGGCGGTG GGGCTCGGTC TCGTGTTGGC CGGTGCGCTC
GGCAATCTCA CCGACCGCAT CTTCCGTGCC CCCGCCGTGT TCCAGGGGCA CGTGGTGGAC
TTCATCTCGG TGTTCGCGCC GAACGGTGAG TTCTTCCCGG TGTTCAACGC CGCGGATTCC
GCGATCACCG TGGGGGCGGG GCTCATCGTG GTGCTGACGC TGTTGGGCAG GGACTACGAC
GGGACCAAGA TCCCTCGCCG CCGCGACGGG AAATCCGACA CCGAGTCGCA CAAGGAGAAG
GAACGTCCGG AGGATTCAGC GTGA
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| Protein sequence | MNTEQQPDPS DTEQSADPTP ARRRVGLLVL VAAVAYVVDV VTKVVATATL EGEEPIRLLG
GAVYLQLLRN PYAAFGMDIG GTWILTVVAI AVVVGIAWFA RKLRSAGWAV GLGLVLAGAL
GNLTDRIFRA PAVFQGHVVD FISVFAPNGE FFPVFNAADS AITVGAGLIV VLTLLGRDYD
GTKIPRRRDG KSDTESHKEK ERPEDSA
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