| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27040 |
|---|
| Symbol | |
|---|
| ID | 8388028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2918627 |
|---|
| End bp | 2919826 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644976738 |
|---|
| Product | methionine adenosyltransferase |
|---|
| Protein accession | YP_003134515 |
|---|
| Protein GI | 257056683 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0192] S-adenosylmethionine synthetase |
|---|
| TIGRFAM ID | [TIGR01034] S-adenosylmethionine synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.593252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.387061 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGCTA ATCGAAGGCT GTTCACCAGT GAGTCCGTCA CGGAGGGCCA CCCGGACAAG
ATCTGTGACG CGATCAGTGA CACCATCCTG GATGCTCTGC TCGCCGCGGA TCCGCGGAGT
CGGGTCGCCG TGGAGACGTT GATCACCACC GGTCAGGTGC ACATCGCCGG TGAGGTGACC
ACCGAAGCGT ACGTGGACGT TCCCACTCTG GTCCGGGATC GTGTGTTGGA GATCGGGTAC
GACTCGTCGG CCAAGGGGTT CGACGGTGCG TCGTGTGGTG TGAACGTGGC GATCGACTCG
CAGTCGCCGG ACATCGCGCA AGGGGTGGAT TCCGCCTACG AGGCCCGGTT GGAGAACGCG
CTGGATGAGT TGGACCGGCA GGGGGCGGGT GATCAGGGGT TGATGTTCGG GTATGCCTGC
TCGGACACTC CGGAGTTGAT GCCGCTGCCC ATCGCCCTGG CCCACCGGTT GTCCCGGCGT
CTCACCGAGG TGCGGAAGAA CGGCACCGTG CCGTATCTGC GGCCGGACGG TAAGACGCAG
GTCACGATCG AGTACGACGG TGACAGGCCG GTGCGGCTGG ACACGGTGGT GATCTCCAGT
CAGCACGCCG AGGGGATCGA CCTGGAGGGC ATGCTCACCC ATGACTTGGT GAAGCACGTC
ATCACGCCGG AGATCGAGTC GCTGGGTCTG GACGCCTCCG AGCCGAAGAC TCTGATCAAC
CCGACGGGCC GGTTCGTGGT GGGTGGTCCG ATGGGTGATG CGGGGCTGAC CGGTCGCAAG
ATCATCGTCG ATACCTATGG CGGTATGGCC CGTCATGGTG GTGGTGCGTT CTCGGGTAAG
GACCCGTCGA AGGTGGACCG CTCGGCGGCG TATGCGATGC GGTGGGTGGC CAAGAACATC
GTCGCGGCGG GCCTGGCCGA TCGTGCCGAG ATCCAAGTGG CCTACGCCAT CGGTAAGGCG
GCTCCGGTGG GGTTGTTCGT GGAGACGTTC GGTACCGAGA AGGTGGACCC GGCCAAGATC
CAGGCTGCGA TCACCGAGGT GTTCGATTTG CGGCCTGCGG CGATTATCCG AGACCTTGAT
CTGTTGCGGC CGATCTATGC GCCCACCGCC GCCTACGGAC ACTTCGGGCG TATCGACATC
GACCTGCCGT GGGAGCGCAC CGACCGTGCC GCGGCGTTGA AGGAAGCGGC GAAGGCGTGA
|
|---|
| Protein sequence | MTANRRLFTS ESVTEGHPDK ICDAISDTIL DALLAADPRS RVAVETLITT GQVHIAGEVT
TEAYVDVPTL VRDRVLEIGY DSSAKGFDGA SCGVNVAIDS QSPDIAQGVD SAYEARLENA
LDELDRQGAG DQGLMFGYAC SDTPELMPLP IALAHRLSRR LTEVRKNGTV PYLRPDGKTQ
VTIEYDGDRP VRLDTVVISS QHAEGIDLEG MLTHDLVKHV ITPEIESLGL DASEPKTLIN
PTGRFVVGGP MGDAGLTGRK IIVDTYGGMA RHGGGAFSGK DPSKVDRSAA YAMRWVAKNI
VAAGLADRAE IQVAYAIGKA APVGLFVETF GTEKVDPAKI QAAITEVFDL RPAAIIRDLD
LLRPIYAPTA AYGHFGRIDI DLPWERTDRA AALKEAAKA
|
|---|
| |