| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_26920 |
|---|
| Symbol | |
|---|
| ID | 8388016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2899429 |
|---|
| End bp | 2900199 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644976726 |
|---|
| Product | endonuclease I |
|---|
| Protein accession | YP_003134503 |
|---|
| Protein GI | 257056671 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2356] Endonuclease I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACTC GAACCGGACG GTGGCTCGCG GTCGCCCTCA CGGCGACGGT CGTGGCCGTG
GGGGCCCCCG CGTCGGCCGA AGCACCGTTC GACGACTACT ACTCCGGGAC CGAAGGACTC
ACCGGCGAGG CGTTGAAGGA CGCCCTGCAC GACATCATCA GTGACGCCGA GCAACTGTCC
TACAGCGAGA TCTGGGACGG GATCAGAGCC ACGGACGAGG ACCCGGCGAA TCCGAACAAC
GTCATCCTCC TCTACAGCGG CGAGTCCCGT TCGAAGAACG CCAACGGCGG CAACGTCGGT
GATTGGAACC GGGAACACGT GTGGGCCAAA TCCCACGGGG GCTTCGGCAC CTCCGGTCCG
GGCGCCGACC TGCACCACCT GCGCCCCACC GACGTGCAGG TGAACGGAAT CCGCGGCAAC
AAGGACTTCG ACAACGGTGG CTCCCCCGTG AACGGCGCCC CGGACAACTA CACCGACGAC
GATTCGTTCG AGCCGCGGGA CGAGGTGAAA GGCGACGTCG CGCGGATGCT GATGTACATG
GCCGTCCGGT ACGAGGGTGA CGACGGCTAC GCCGACCTGG AGCTCAACGA TCGAGTCGGC
AACGGCTCCG CGCCCTACCA CGGTCGGATC TCGGTGCTGC TGGAGTGGCA CGAGGCCGAC
CCGGTGGACG ACTTCGAACG CAGGCGCAAC GAGGTCATCT ACGAGCAGTT CCAGCACAAC
CGCAACCCGT TCATCGACCA TCCCGAATGG GCGTGGGAGA TCTGGGGCTG A
|
|---|
| Protein sequence | MRTRTGRWLA VALTATVVAV GAPASAEAPF DDYYSGTEGL TGEALKDALH DIISDAEQLS
YSEIWDGIRA TDEDPANPNN VILLYSGESR SKNANGGNVG DWNREHVWAK SHGGFGTSGP
GADLHHLRPT DVQVNGIRGN KDFDNGGSPV NGAPDNYTDD DSFEPRDEVK GDVARMLMYM
AVRYEGDDGY ADLELNDRVG NGSAPYHGRI SVLLEWHEAD PVDDFERRRN EVIYEQFQHN
RNPFIDHPEW AWEIWG
|
|---|
| |