Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_26350 |
Symbol | |
ID | 8387959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2841370 |
End bp | 2841996 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644976673 |
Product | dihydrofolate reductase |
Protein accession | YP_003134450 |
Protein GI | 257056618 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.595114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCTCA CCGCCACCAC GTGGATCACC GTCGACGGTG TGATGCAGGG ACTCGGTGCC CCGGACGAGG ACCGTAGGGG CGGGTTCGAA CGCGGTGGAT GGGCCATGCC GCTGTACGAC GACGAGGCCG CGACGTTTCT GAACCGGGTC TACCAGCGCG CCGACGCGTT CCTGTTCGGC CGGCACACCT ACGAGATCTT CGCCGGATAC TGGGGAGCGA TGGTCGATCC GAACAATCAC CCCATCGCGG CGGCGTTGCA CACCAAGCCC AAATACGTAG CGTCGACCAC GCTCACCGAC CCGACGTGGG TCGACACCAC AGTCCTCTCC GACGACCTCG CGACCACCCT CGCGGACCTG AAGGTCACGC GGGAAGGCGA GCTGCAGGTG CACGGCAGCG GCGTCCTCGT TCGTTGGTTA CTGGCCAACC AGCTCGTCGA CGAGATCACC TTGCTGGTCT GTCCCGTGAT CGTCGGCCAA GGGAGGCGAC TGTTTCCCGA CACCGGCCCG GACACGGCGC TTGATCTGGT GGAATCGCGA ACCACCCCGA AGGGGGTGAC GATCCAGAGC TACCGACCCA TCGGTCGACC GCAGTACGCC GTGGCCGCGC CGAACCCCAA CACGTGA
|
Protein sequence | MKLTATTWIT VDGVMQGLGA PDEDRRGGFE RGGWAMPLYD DEAATFLNRV YQRADAFLFG RHTYEIFAGY WGAMVDPNNH PIAAALHTKP KYVASTTLTD PTWVDTTVLS DDLATTLADL KVTREGELQV HGSGVLVRWL LANQLVDEIT LLVCPVIVGQ GRRLFPDTGP DTALDLVESR TTPKGVTIQS YRPIGRPQYA VAAPNPNT
|
| |