| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_26190 |
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| Symbol | |
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| ID | 8387943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2823082 |
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| End bp | 2823987 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644976657 |
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| Product | ABC-type proline/glycine betaine transport system, periplasmic component |
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| Protein accession | YP_003134434 |
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| Protein GI | 257056602 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGCTGG CCGCGCTTCC CGCCGCCTGC GCCCTCCCCC AAGGTTTCCA GGACAACGAC
TCCACCGAGG ATGAGGTGCG GCTCGTACAG CAGCCGTGGG AGGACCTGAT CGTCGAGAAC
GAGATCGTGT CACAGGTGCT GAGCAGGCTC GGCTACCGCG CACGCGTCCA CGAACTGTCC
GTACCACTGG GCGCGCAGGC CCTCGCGAAC GGTCAGGCCG ACGCCTATCT CGGCAACTGG
TGGCCGAGTC AGCGACCCGT CTACCAACAA TATCTGCGCG AGGGGCGGAT CGAGGTCGCC
AGCACCATGG TGACCGGTGC GCAGTACGCC CCGGTCGTAC CGGACTACGT GGTCCGAGAG
CACGGCGTAC GTTCGTTGGC CGATCTCGCC GAGAAGGCCC ACCTGTTCGA CCACGAAATA
CTCGGCATCG AGCCGGGGAC CCCCGGTAAC CAATACATCC TCGACGCGAT CCGCGACGAC
AGCTACGGAC TCGGCGACTG GAGTCTGGTC CAGTCGAGTA CGGCCGCGAT GCTCAGCGAG
GTCGAACGAC GCACCAGCGA ACGCAAACCC GTCGTGTTCC TCGGCTGGAG CCCGCACTGG
ATGAACGTGG AGTGGAACCT CCACTACCTG GACGACCCGC AGGGCATCTG GCCGGGTTCG
GGGGAGATCC GAGTGGTCTT CAACGAGGAC TTCGCCGAGA AGAACCCGGA CATAGCGAAG
TTCCTCTCAC AGATCCGGAT CGACCGCGAC ACCGCATCGG ATTGGATCCA CCGATTGAGC
AAGGAGAAGG TTCCGGCCAA ACAGATCGCC CACGAATGGA TCCGCGCGCA TCCCGACGAG
GTGCGGACGT GGCTGCGCGG GGTGCGGACC GCGGACGGCG AACCCGCATC CGCGGCCATC
CCCTGA
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| Protein sequence | MVLAALPAAC ALPQGFQDND STEDEVRLVQ QPWEDLIVEN EIVSQVLSRL GYRARVHELS
VPLGAQALAN GQADAYLGNW WPSQRPVYQQ YLREGRIEVA STMVTGAQYA PVVPDYVVRE
HGVRSLADLA EKAHLFDHEI LGIEPGTPGN QYILDAIRDD SYGLGDWSLV QSSTAAMLSE
VERRTSERKP VVFLGWSPHW MNVEWNLHYL DDPQGIWPGS GEIRVVFNED FAEKNPDIAK
FLSQIRIDRD TASDWIHRLS KEKVPAKQIA HEWIRAHPDE VRTWLRGVRT ADGEPASAAI
P
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