| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25930 |
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| Symbol | rpsA |
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| ID | 8387917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2794741 |
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| End bp | 2796228 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976633 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_003134411 |
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| Protein GI | 257056579 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG ACACCACCAC CGCCCCGAAC TCCTCGCAGG CGAACCAGGT CGCCGTGAAC
GACATCGGGA CGGAGGAAGA CTTCCTCGCT GCTATCGACA AGACAATCAA ATACTTCAAC
GATGGTGACA TCGTCGAAGG CACCATCGTC AAGGTCGATC GCGACGAAGT GCTGCTCGAC
ATCGGTTACA AGACCGAGGG TGTCATCCCG TCCCGCGAAC TGTCCATCAA GCACGATGTC
GACCCGGCAG AGGTTGTCGC CGTCGGTGAT GAGGTGGAGG CCCTTGTCCT GCAGAAGGAG
GACAAGGAAG GCCGTCTGAT CCTGTCCAAG AAGCGCGCGC AGTACGAGCG TGCCTGGGGC
ACCATCGAGG AGCTTAAGGA GAAGGACGAG CCGGTTCGCG GCACAGTCAT CGAGGTCGTC
AAGGGCGGCC TGATCCTCGA CATCGGCCTG CGTGGCTTCC TGCCCGCCTC GCTCGTCGAG
ATGCGCCGTG TGCGCGACCT CCAGCCCTAC GTCGGTCGCG AGCTCGAGGC CAAGATCATC
GAGCTGGACA AGAACCGCAA CAACGTGGTC CTGTCCCGCC GTGCCTACCT GGAGCAGACC
CAGTCCGAGG TGCGCAGCGA GTTCCTCAAC GCGCTCGCCA AGGGCCAGGT CCGCAAGGGT
GTCGTGTCCT CCATCGTCAA CTTCGGCGCG TTCGTCGACC TCGGCGGTGT CGACGGTCTG
GTGCACGTGT CGGAGCTGTC CTGGAAGCAC ATCGACCACC CGAGCGAGGT CGTGGAGGTC
GGCCAGGAGG TCACGGTCGA GGTGCTGGAC GTCGACATGG ACCGCGAGCG CGTGTCCCTG
TCGCTGAAGG CCACCCAGGA AGACCCGTGG CGTCAGTTCG CCCGCACCCA CGCCATCGGC
CAGATCGTGC CGGGCAAGGT CACCAAGCTC GTGCCGTTCG GTGCGTTCGT CCGCGTCGAG
GAGGGCATCG AGGGCCTGGT GCACATCTCG GAGCTGGCCG AGCGCCACGT CGAGATCCCC
GAGCAGGTCG TGCAGGTCGG CACCGAGGTC ATGGTCAAGG TCATCGACAT CGACCTCGAG
CGTCGCCGCA TCTCGCTGTC GCTCAAGCAG GCCAACGAGG GGTACAGCCC GGACGCCGAG
TTCGACCCCA CGCAGTACGG CATGGCGGCC GAGTACGACG AGCACGGCAA CTACATCTAC
CCCGAGGGCT TCGACCCCGA CACGCAGGAG TGGCAGGAAG GCTACGAGAA GCAGCGTGAG
GAGTGGGAGC GGCAGTACGC CGAGGCGCAC GCTCGCTACG AGAAGCACAT GCGCCAGGTC
GCGGAGGCCC AGAAGGCCAA CGCCGCTGCC GCCGCCGCTG AGGGTGCTGC CGAGGGCGGC
GACTCCGGCT ACGGCTCGGA GGGCGCTGAG CAGGAGCGTT CGGGTGGCAC ACTCGCCAGC
GACGAGCAGC TCGCGGCCCT GCGCGAGAAG CTGTCGGGCG GCGCGTGA
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| Protein sequence | MTIDTTTAPN SSQANQVAVN DIGTEEDFLA AIDKTIKYFN DGDIVEGTIV KVDRDEVLLD
IGYKTEGVIP SRELSIKHDV DPAEVVAVGD EVEALVLQKE DKEGRLILSK KRAQYERAWG
TIEELKEKDE PVRGTVIEVV KGGLILDIGL RGFLPASLVE MRRVRDLQPY VGRELEAKII
ELDKNRNNVV LSRRAYLEQT QSEVRSEFLN ALAKGQVRKG VVSSIVNFGA FVDLGGVDGL
VHVSELSWKH IDHPSEVVEV GQEVTVEVLD VDMDRERVSL SLKATQEDPW RQFARTHAIG
QIVPGKVTKL VPFGAFVRVE EGIEGLVHIS ELAERHVEIP EQVVQVGTEV MVKVIDIDLE
RRRISLSLKQ ANEGYSPDAE FDPTQYGMAA EYDEHGNYIY PEGFDPDTQE WQEGYEKQRE
EWERQYAEAH ARYEKHMRQV AEAQKANAAA AAAEGAAEGG DSGYGSEGAE QERSGGTLAS
DEQLAALREK LSGGA
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