| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25690 |
|---|
| Symbol | |
|---|
| ID | 8387893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2766666 |
|---|
| End bp | 2767172 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644976609 |
|---|
| Product | translation initiation factor 3 |
|---|
| Protein accession | YP_003134387 |
|---|
| Protein GI | 257056555 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
|---|
| TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGACCGA ACGGTGAGCA GGTCGGTATC GTCCGTATCG AGGACGCGCT GCGGCTCGCT
CAGGAGGCCG ACCTCGATCT CGTCGAGGTC GCCCCACAGG CACGTCCGCC TGTGGCCAAG
CTCATGGACT ACGGGAAGTA CAAGTACGAA AGTGCTCAGA AAGCCCGTGA GTCCCGCCGC
AATCAGCAGC TCACCGTTAT CAAGGAACAG AAGCTGCGCC CCAAGATCGA CCCGCACGAT
TACGAGACGA AGAAGGGGCA TGTGTCCCGA TTCCTCGAGG CGGGGAACAA GGTCAAGGTG
ACGATCATGT TCCGCGGGCG CGAGCAGTCG AGGCCGGAGC TCGGGTTCCG ACTGCTGCAG
CGACTCGCCG AGGACGTGGC CGAACTGGGC TTCGTCGAAT CGAAGCCGAA GCAGGACGGT
CGCAACATGG TCATGGTTCT TGCGCCACAC AAGAACGCCA AGGCGAAGTC GAAGGCGTCG
AAGGGCGCAG ACAGCAGCGG GTCGTGA
|
|---|
| Protein sequence | MGPNGEQVGI VRIEDALRLA QEADLDLVEV APQARPPVAK LMDYGKYKYE SAQKARESRR
NQQLTVIKEQ KLRPKIDPHD YETKKGHVSR FLEAGNKVKV TIMFRGREQS RPELGFRLLQ
RLAEDVAELG FVESKPKQDG RNMVMVLAPH KNAKAKSKAS KGADSSGS
|
|---|
| |