| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25590 |
|---|
| Symbol | |
|---|
| ID | 8387883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2755658 |
|---|
| End bp | 2756587 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644976599 |
|---|
| Product | ornithine carbamoyltransferase |
|---|
| Protein accession | YP_003134377 |
|---|
| Protein GI | 257056545 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCC ATTTCCTCCG TGACGACGAC CTCACGCCGA ACGAGCAGGC CGAGGTGCTC
GACCTCACCG CCGAGCTGAA GCGGCAACCG TACGGCACCG CCTTGTCCGG ACCGAAGTCC
GTCGCGGTGA TCTTGGAGAA GAACTCGACC CGCACCCGGT TCTCGTTCGA GGTGGGCATA
GCCCAGCTGG GCGGGCATCC GGTGGTGGTC GACGGGCGCA ACATGCAGCT GGGGCGGGAG
GAGACCCTCG GCGACACCGC GCGTGTTCTG TCGCGGTACG TCGACCTCGT CGTGTGGCGT
ACGTTCGGGC AGGAACGGCT CGACGAGTTC GCCGCCGTCG CGACGGTGCC CGTCGTGAAC
GCGCTCACCG ACGAGTTCCA CCCCTGCCAG GTCCTCGCCG ACCTGTTCAC GGTGCGGGAG
CGCAAGGGTG CCCTCTCCGG CCTCACGTTG ACATACCTCG GTGACGGCGC GAACAACATG
GCCCATTCGT TGCTGCTCGG CGGGGTCACG GCGGGCATGC ATGTCCGGGT CGCCGCTCCG
GAAGGTTTCC ACCCTCTGCC CTGGGTGCTC GAGGCCGTGG AGAAGCGGGC TTCCGAAACC
GGCGGCAGCG CCACGGTGTT CACCGATCCG CACGCCGCGG TCGACGGGGC CGATGTCGTG
ACCACCGACG CGTGGACGTC CATGGGCCAG GAAAAGGACG GCAAGGATCG GGTGACGCCG
TTCCTGCCGT ATCAGCTCAA CGCCGATCTG CTTGCCAAGA CCGGTAAGGA CGACACCATC
GTGCTCCATG ATCTTCCTGC ACACCGTGGG ATGGAGATCA CCGACGAGGT GATCGACGGT
CCCGCCAGTG CGGTGTGGGA TGAGGCGGAG AACCGGTTGC ATGCCCAAAA GGCGCTTCTG
GTGTGGCTGC TGAAGCAGGA GCGACGATGA
|
|---|
| Protein sequence | MPRHFLRDDD LTPNEQAEVL DLTAELKRQP YGTALSGPKS VAVILEKNST RTRFSFEVGI
AQLGGHPVVV DGRNMQLGRE ETLGDTARVL SRYVDLVVWR TFGQERLDEF AAVATVPVVN
ALTDEFHPCQ VLADLFTVRE RKGALSGLTL TYLGDGANNM AHSLLLGGVT AGMHVRVAAP
EGFHPLPWVL EAVEKRASET GGSATVFTDP HAAVDGADVV TTDAWTSMGQ EKDGKDRVTP
FLPYQLNADL LAKTGKDDTI VLHDLPAHRG MEITDEVIDG PASAVWDEAE NRLHAQKALL
VWLLKQERR
|
|---|
| |