Gene Svir_25570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25570 
Symbol 
ID8387881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2753902 
End bp2755110 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content66% 
IMG OID644976597 
Productargininosuccinate synthase 
Protein accessionYP_003134375 
Protein GI257056543 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGC GGGTGGTGCT CGCGTACTCG GGCGGGCTCG ACACCTCGGT GGCGATCGGT 
TGGATCGCCG AGGAGACCGG TGCCGAGGTG GTGGCCGTCG CCGTCGACGT CGGTCAGGGC
GGCGAGGACA TGGAGACCAT CCGCAAGCGC GCTCTGGAGT GCGGTGCGGT GGAGGCGGTC
GTGTCCGATG CCAAGGACGA GTTCGCCGAG GAGTACTGCT TGCCCGCACT GCAGGCGAAC
GCGCTGTACA TGGACCGTTA TCCGCTGGTT TCGGCTCTGT CCCGGCCGCT GATCGTCAAG
CACCTGGTGC GGGCGGCCGA GCGTTACGGC GCCACCACCG TGGCGCACGG TTGCACCGGT
AAGGGCAATG ACCAGGTGCG GTTCGAGGTG GGCATCGGCG CGCTCGCTCC CGACCTGAAG
GTCATCGCCC CCGTGCGCGA CTTCGCGTGG ACCCGGGAGA AGGCGATCTC CTGGGCGGAG
GAGCGCAACC TCCCGATCGA CGTGACGAAG AAGTCGCCGT TCTCGATCGA CCAGAACGTG
TGGGGCCGGG CCGTCGAGAC GGGCGTGCTG GAGGACCTGT GGAACGAGCC GCCGAAGGAG
GTCTACTCCT ACACCCAGGA CCCGACCGTC CACTTCCAGG CTCCCGACGA GGTCATCATC
ACCTTCGAGA AGGGTGTCCC GGTCGCCATC GACGGCAAGA AGGTCACGGT CCTGGAGGCC
ATCCAGGAGA TGAACCAGCG CGCCGGTGCG CACGGTATCG GCAGGCTCGA CATGGTGGAG
GACCGGCTCG TCGGGATCAA GAGCCGGGAG GTGTACGAGG CTCCCGGTGC CATCGCGTTG
ATCACCGCGC ACCAGGAGCT GGAGAACGTC ACGGTCGAGC GTGACCTCGC CCGGTTCAAG
CGTCAGGTCG AACAGCGTTG GGGCGAGCTG GTGTACGACG GGCTGTGGTT CTCGCCGTTG
AAGGACGCTC TCGACGGCTT CATCGCCAAG GCCCAGGAGC ACGTGTCGGG CGACATCCGG
ATGGTCCTGC ACGGCGGTAC CGCCACCGTC ACGGGGCGGC GCAGCGATGA GTCGCTCTAC
GACTTCAACC TGGCCACCTA CGACGAGGGC GACACGTTCG ACCAGTCGTT GGCCAAGGGC
TTCGTGCAGC TGTGGGGCTT GCCCAGCAAG ATCGCCGCGA AGAGGCAGCA GAACAAGAAC
AACAACTGA
 
Protein sequence
MTERVVLAYS GGLDTSVAIG WIAEETGAEV VAVAVDVGQG GEDMETIRKR ALECGAVEAV 
VSDAKDEFAE EYCLPALQAN ALYMDRYPLV SALSRPLIVK HLVRAAERYG ATTVAHGCTG
KGNDQVRFEV GIGALAPDLK VIAPVRDFAW TREKAISWAE ERNLPIDVTK KSPFSIDQNV
WGRAVETGVL EDLWNEPPKE VYSYTQDPTV HFQAPDEVII TFEKGVPVAI DGKKVTVLEA
IQEMNQRAGA HGIGRLDMVE DRLVGIKSRE VYEAPGAIAL ITAHQELENV TVERDLARFK
RQVEQRWGEL VYDGLWFSPL KDALDGFIAK AQEHVSGDIR MVLHGGTATV TGRRSDESLY
DFNLATYDEG DTFDQSLAKG FVQLWGLPSK IAAKRQQNKN NN