Gene Svir_25410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25410 
Symbol 
ID8387865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2733880 
End bp2734512 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content69% 
IMG OID644976581 
ProductNTP pyrophosphohydrolase 
Protein accessionYP_003134362 
Protein GI257056530 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.584509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA GCACCCCGGG AAACCACGAA TTCACCGTCG CGTCCTCACG AGACATCCAC 
ATCGGACGTG TCGTGGGTCT GCGGATCGAC GAGGTGGTGA TGCCGGGTGG TTCCACGGCC
TCCCGCGAGG TCGTGGAGCA CCTCGGCGCC GTCGCGGTGT GCGCGGTGGA CGACGACGGT
GCCGTGACAC TCGTCCACCA GTACCGGCAT CCGCTCGGCG ACCGGTTGTG GGAACTGCCC
GCCGGTTTGC TCGACCAACC CGGGGAGGAC CCGGTGGAAG CGGCCCGTCG TGAACTCGTC
GAGGAGGCGG GACTGGAGGC GCGGCGTTGG GACACCCTCG TGGACATCGC CGCGTCACCC
GGCTTCACCG ACGAGGTGGT GCGCGTGTTC CTGGCACGCG AGCTGACCCG GGTCGACCGC
AAGGCCCACG GTGAGGAGGA GGCCGATTTG GTCGTTCACT CCGTTCCGTT GGAGCAGGCG
GTGCACATGG CGTTGTCCGG AAAGATCGTC AACGGGGCCA CCGTCGGTGG AGTGCTCGCC
GCGCACACCG TGCTCACCGG TGGCGTACAA CCCCGACCCG CCGACGCACC ATGGCGGCAT
CGACCGACCC GTTTCGCGTC CCGTACCCGC TGA
 
Protein sequence
MSTSTPGNHE FTVASSRDIH IGRVVGLRID EVVMPGGSTA SREVVEHLGA VAVCAVDDDG 
AVTLVHQYRH PLGDRLWELP AGLLDQPGED PVEAARRELV EEAGLEARRW DTLVDIAASP
GFTDEVVRVF LARELTRVDR KAHGEEEADL VVHSVPLEQA VHMALSGKIV NGATVGGVLA
AHTVLTGGVQ PRPADAPWRH RPTRFASRTR