| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25280 |
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| Symbol | thyX |
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| ID | 8387852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2723023 |
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| End bp | 2723775 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976568 |
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| Product | FAD-dependent thymidylate synthase |
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| Protein accession | YP_003134349 |
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| Protein GI | 257056517 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0348718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGAAA CGGTGGCACC CAAGGTGCGG TTGATCGCGA AGACGGAGTT CTTCCCGCCC
GAGGACGTGC CGTGGACGAC CGATGCGGAC GGCGGGCAGG CGCTCGTCGA GTTCGCAGGC
CGGGCGTGCT ACCAGTCGTG GTCGAAGCCG AACCCGAAGA CGGCGACGAA CGCGGGTTAT
CTGGACCACA TCATCGAGGT CGGCCATCTG TCGGTGCTGG AGCACGCGAG TGTCAGCTTC
TACATCACCG GCATCTCGCG GTCGCTGACC CACGAGCTCA TCCGGCACCG CCACTTCTCC
TACTCGCAGT TGTCCCAGCG GTACGTCCCG GAGCGCGACG CCGCGTTCGT CGAGCCGGAC
GTGATCGCGA ACGACCCGGA GTTGCACGAG AAGTTCCTCG CTGCCACCCA GGCCAGCGTC
GATGCCTACA CCGAACTGCT CGCCAAGCTG GAGGAGAAGT TCGCCGACGC TCCTAACGCG
ACGCTGCGTC GTAAACAGGC GCGGCAGGCC GCTCGGTCGG TGCTGCCCAA CGCGACCGAA
ACCCGGATCG TCGTCACCGG TAACTACCGC GCCTGGCGGC ATTTCATCGC CATGCGCGCC
ACCGAACACG CCGATGTGGA GATTCGGGCG CTGGCCGTGG AATGTCTCCG ACAGCTGCAG
AAGGTCGCCG AGAACGCCTT CGCCGATTTC ACGATCTCGA CCTTGCCCGA CGGCACCGAA
GTGGCGTCGA GCCCCAAGGT CGCCGAGAGC TGA
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| Protein sequence | MAETVAPKVR LIAKTEFFPP EDVPWTTDAD GGQALVEFAG RACYQSWSKP NPKTATNAGY
LDHIIEVGHL SVLEHASVSF YITGISRSLT HELIRHRHFS YSQLSQRYVP ERDAAFVEPD
VIANDPELHE KFLAATQASV DAYTELLAKL EEKFADAPNA TLRRKQARQA ARSVLPNATE
TRIVVTGNYR AWRHFIAMRA TEHADVEIRA LAVECLRQLQ KVAENAFADF TISTLPDGTE
VASSPKVAES
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