| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25260 |
|---|
| Symbol | |
|---|
| ID | 8387850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2720975 |
|---|
| End bp | 2722480 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644976566 |
|---|
| Product | protein kinase family protein |
|---|
| Protein accession | YP_003134347 |
|---|
| Protein GI | 257056515 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.981301 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCGACG AGCAGACCGC TACCACGCCC GCCTTCTCCG CTCCGAGAAT GATCGCCAAT
CGGTATCGGG TGGGTGCTGA GCTGGGGCGT GGCGGCATGG GTGTCGTCTG GCGCGCCGAG
GACACCGTGA TCGGCAGGCA GGTGGCCATC AAGGAACTGC GCCTGCCCGA CGGCGCCGAG
GACGCAGGCG TGTTCCAGGA GCGCGTGCTG CGCGAAGTAC GGACCGGCGG TCGCCTCAAC
GACCCGGCCG TGGTGACGGT GTTCGACGTG GTGGCGGAGC ACGACACCAC CTACATCGTC
ATGGAACTGG TCGAGGCGCC CACGTTGTCG GACCTCGTGC GGCGGAACGG CCCGCTGCCC
CCGCAACAGG TCGCCTCGAT CGGGTTGCAG GTGTTGTCGG CGTTGCGTGC CGCTCACCAG
GCGGGCATCG TGCATCGTGA CGTCAAACCG GCCAACATCA TGGTCGGCGC GGACGGCAGG
GTGAAACTCA CCGACTTCGG TATCGCCCAG GCCATCGACG ATCCACGCAT CACCACCAGC
GGGATGCTCG TCGGCTCGCC CGCGTTCATG GCGCCCGAGC GGGTGGAAGG TCGAGAGGCG
ATGCCCGCCT CGGACCTGTG GTCGCTGGGG GCGTCGTTGT TCTTCGCCGC GGAGGGTTCC
GTGCCGTTCG AGAGAGCGAG CACGGCGGCC ACTCTTCACG CGATCATGAC CGAGGTCCCC
TACCTGACGC GGGTGCACGG TCCGCTCGCG TCCGCGATCA TGGGTCTGAT GACCGCGACC
CCGGAGGGAC GGATCACGAC CGAACAGGCG CACGGACTTC TCAGCCTCGC CGCGCAGCAG
CCGGGGTCGA TACCCTCCCC GCCCGGGCAG CCGACATCGC ACCAGCCCGG GTCGGCTCCC
ACGATGGTCG CCGGGCACCC CACCTACGGT GGTGTCCCCG CCCCGCAGCG TATGAGCCCG
GGTAAGAAGA AGGCGCTGAT CACCGGTGGT GCGCTCGCGG CCGTCGGCCT GCTGGTCGGT
GGCTTCTTCC TCGGTAAACC GGTGTGGTCG CCCGATGTGG ACGAACAGAT GCTGCCCACG
CTCACCTACG GTGAGAACGG TGACATCGAG CAACTGAACG CGGACGGGTA CAACGGCTGT
GTCAACACGA CCCTGGACAA GGGTCGCTCG CTGGCCGAGA GCAACTGGGT CGGATGCGAC
CAGTCGCACG ACCTCGAGCT GTACACCACC TGGAATCTGG GCTATTCGAA CGACGAGGAC
GCCGTGGCGT ACCGGTATCC GGGTCAGGAG GCGTTCGCAC ATTTCGGGGA GACGGTGTGT
GGCTTCTCCT TCCACTCCAG CAAGGTCAAG GACGAGTTCC GTGATCAACT GGTCTACCGG
GCGTTGATTC CCACCAAGGA GGAGTGGGAG AAGCAACAGG ACGACCCGGT CCGGTCGGTC
TACTGCCTGC TCGGCCGGGA GGACGGCACC CAGATGTCCG AGTCGGTGGT GCAACAGATC
CGGTAG
|
|---|
| Protein sequence | MTDEQTATTP AFSAPRMIAN RYRVGAELGR GGMGVVWRAE DTVIGRQVAI KELRLPDGAE
DAGVFQERVL REVRTGGRLN DPAVVTVFDV VAEHDTTYIV MELVEAPTLS DLVRRNGPLP
PQQVASIGLQ VLSALRAAHQ AGIVHRDVKP ANIMVGADGR VKLTDFGIAQ AIDDPRITTS
GMLVGSPAFM APERVEGREA MPASDLWSLG ASLFFAAEGS VPFERASTAA TLHAIMTEVP
YLTRVHGPLA SAIMGLMTAT PEGRITTEQA HGLLSLAAQQ PGSIPSPPGQ PTSHQPGSAP
TMVAGHPTYG GVPAPQRMSP GKKKALITGG ALAAVGLLVG GFFLGKPVWS PDVDEQMLPT
LTYGENGDIE QLNADGYNGC VNTTLDKGRS LAESNWVGCD QSHDLELYTT WNLGYSNDED
AVAYRYPGQE AFAHFGETVC GFSFHSSKVK DEFRDQLVYR ALIPTKEEWE KQQDDPVRSV
YCLLGREDGT QMSESVVQQI R
|
|---|
| |