| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25240 |
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| Symbol | |
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| ID | 8387848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2718126 |
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| End bp | 2719823 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976564 |
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| Product | predicted hydrolase of the metallo-beta-lactamase superfamily |
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| Protein accession | YP_003134345 |
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| Protein GI | 257056513 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCAGA AGTCAATCGG GCCGGGACCC ACACACCTAC CACCGCCGCT GCCCAAGGGC
GCGCTCCGAG TCGTCGCCCT TGGCGGCATC GGCGAGGTCG GCCGCAACAT GACCGTCTTC
GAGTACGACG GTCGACTCCT CGTGGTCGAT TGCGGCGTCC TCTTCCCTGA GGACGCCCAG
CCGGGTGTGG ACCTGATCCT GCCCGACTTT CGAGCGATCG AGGATCGGAT CGGGGACATC
GAGGCACTCG TGCTCACCCA TGGGCACGAG GACCACATCG GTGCCGTGCC CTTCCTCCTT
CGCATGCGGC CCGACCTGCC GGTGTACGGA TCGCGGTTCA CACTGGCCCT GCTGGAGGCC
AAGTGCAAGG AACACCGGCA GCGCCCGACG TTGGTGCAGG TCGCCGAGGG GCAGCGGCGT
CGGGTCGGTC CGTTCGAGTT GGAGTTCTTC GCGGTCAACC ACTCGATCCC CGACGCGCTC
GCCGTCGCGT TGCGTACCCC CGCCGGGCTC GTGCTGCACA CGGGTGACAT CAAGCTCGAC
CAGCTGCCGC TCGACGGTAG GCTCACCGAC CTGGCGGGGT TCTCCCGGCT CGGCGACGAA
GGCGTCGATC TGCTGTGCAT CGACTCCACC AACGCCGAGG TCCCGGGTTT TGTGACCTCG
GAGCGCGACA TCGGACCCGT ACTGGACGAC GTCATCGCGC GTGCGCGGCA GCGGGTCATC
GTGGCGTGTT TCGCCAGTCA CGTCCACCGA GTGCAGCAGG TACTCGACGC CGCCCATCGA
CACGGTCGCC GGGTGACGTT CGTGGGCCGG TCGATGATGC GCAACATGAC CATCGCGGCC
GAACTGGGAC TGTTGAGCAT CCCGGAGGGG CTGCTGATCG ACCTCGACGA GGCCGTGAAC
CTGCCCGAGT CCAAGGTGCT GTTCATCTCC ACGGGCTCCC AGGGCGAGCC GCTGTCGGCG
CTGTCGCGCA TGGCGCGGGG CGAGCACAAG CAGATCTCGA TCCGGGCGGG GGACACGGTG
GTGCTGGCGA GCTCCCTCAT CCCCGGTAAC GAGACCGCGG TGTTCGCCGT CATCAACGGC
CTGGTCCGAC TCGGTGCCGA CGTCGTGCAC CAGGGCAACG CGAAGGTGCA CGTGTCGGGA
CACGCGTCAG CGGGGGAGCT GCTGTTCCTC TACAACGCCC TGCGCCCCAA GAACGTGATG
CCGGTGCATG GCGAATGGCG GCATCTGCGG GCGAACGCGG AGTTGGCCGT GCGCACGGGC
GTGGCCGAGG ACAACGTGGT CTTGGCCGAA GACGGCGTGG TGGTCGACCT CGTCGACGGC
AAGGCCTCCA TCACCGGGCG GGTCGAGGTC GGCATGGTGT ACGTCGACGG GTTGTCGGTC
GGTGACGTGG GTGAATCCAC GCTGTCCGAT CGATTGATCC TCGGCGAGGG CGGATTCATC
GCCATCACCG TGGCCGTCGA CTCGACCACC GGGCGTGCCA TGAGCTCGCC CACCCTGTCG
GGACGAGGGT TCTCCGACGA CCCGAAGGCT CTCGACGAGG TGACACAGCT GGTGGAGATG
GAGCTGTCGC GCACCGAGGC CGAGGGCATC ACCGATACCC ACCAGATCGC TCAAGCCGTC
CGGCGGGTGG TGGGCCGGTG GGTCGCCGAG ACCTACCGGC GTCGGCCGAT GATCGTGCCG
ACGGTCATCC CCGTCTGA
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| Protein sequence | MSQKSIGPGP THLPPPLPKG ALRVVALGGI GEVGRNMTVF EYDGRLLVVD CGVLFPEDAQ
PGVDLILPDF RAIEDRIGDI EALVLTHGHE DHIGAVPFLL RMRPDLPVYG SRFTLALLEA
KCKEHRQRPT LVQVAEGQRR RVGPFELEFF AVNHSIPDAL AVALRTPAGL VLHTGDIKLD
QLPLDGRLTD LAGFSRLGDE GVDLLCIDST NAEVPGFVTS ERDIGPVLDD VIARARQRVI
VACFASHVHR VQQVLDAAHR HGRRVTFVGR SMMRNMTIAA ELGLLSIPEG LLIDLDEAVN
LPESKVLFIS TGSQGEPLSA LSRMARGEHK QISIRAGDTV VLASSLIPGN ETAVFAVING
LVRLGADVVH QGNAKVHVSG HASAGELLFL YNALRPKNVM PVHGEWRHLR ANAELAVRTG
VAEDNVVLAE DGVVVDLVDG KASITGRVEV GMVYVDGLSV GDVGESTLSD RLILGEGGFI
AITVAVDSTT GRAMSSPTLS GRGFSDDPKA LDEVTQLVEM ELSRTEAEGI TDTHQIAQAV
RRVVGRWVAE TYRRRPMIVP TVIPV
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