Gene Svir_25180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25180 
Symbol 
ID8387842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2711801 
End bp2712370 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content66% 
IMG OID644976558 
ProductN-acetylglutamate synthase 
Protein accessionYP_003134339 
Protein GI257056507 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTGC AAGCACCCCT AATCCGGCGC GCACGCATCG CGGACGTGCG CAGAATCAAG 
GCACTGGTCG ACTCCGATGC CGGCCAGGGG CTGCTGAAGA AAGACCTGAT CACCCTCTAC
GAGGACGTGC AGGAGTTCTG GGTCGCAGAA CTCGACGGGA AGGTGGTGGG CTGCGGCGCC
CTCCACGTGA TGTGGGAGGA CCTCGCCGAG ATCCGCACGG TCACCGTCGA CCGCGCCGTA
CGCGGCCGCG GCATCGGACA CGCGCTCGTC GACCGGCTCA TCGACCTGGC CGTGGAACTG
GGATTGAAGC GGCTGTTCGT GCTCACGTTC GAAACCGAGT TCTTCGCCCG ACACGGCTTC
TCCGAGATCA CGGGCACACC CGTGCCGAAG GAGGTCTACG AGGAGATGCG CCGCTCGGCC
GACACCGGTG TCGCCGAGTT CCTCGACCTG CCCTTCGTCA AGCCCAACAC GCTCGGCAAC
ACGCGCATGC TGCTCCATCT CGACGAGCGG AAGAAGGCCG CCCGTCCTTC CCGTTCCCTG
AAGCCGTCGC TAGGAGCGGG CTCCCAGTAG
 
Protein sequence
MPVQAPLIRR ARIADVRRIK ALVDSDAGQG LLKKDLITLY EDVQEFWVAE LDGKVVGCGA 
LHVMWEDLAE IRTVTVDRAV RGRGIGHALV DRLIDLAVEL GLKRLFVLTF ETEFFARHGF
SEITGTPVPK EVYEEMRRSA DTGVAEFLDL PFVKPNTLGN TRMLLHLDER KKAARPSRSL
KPSLGAGSQ