| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25140 |
|---|
| Symbol | |
|---|
| ID | 8387838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2708507 |
|---|
| End bp | 2708983 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644976554 |
|---|
| Product | Helix-turn-helix protein |
|---|
| Protein accession | YP_003134335 |
|---|
| Protein GI | 257056503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGC TGTTGCGTGA GGCGATCGGT GATCGGCTCC GTCATGCCCG CACCACCAAG
CGCCGGACGC TGCGCGATAT CTCCCGCGCC GCCAAGGTGA GTCTCGGGTA CTTGTCCGAG
GTCGAGCGAG GCCAGAAGGA GGCGTCCAGC GAGTTGCTCG CCTCGATCTG CGAGGCGCTG
GAGCTTCCTC TCGGCGAGTT GCTGCACAAT GTCGCGGCGG ATGTGTCGGC CCTCGATCGC
GTCAACTCGG GTGTCGACCC CGCGGCTGAG CCGAGGCCGG ACCAGGCCCG TGCGAGCGAT
ACCGGCGGCG CACGTGTCGC GGAAGGTAAG GAACCGGTCT CAGCTGGTTC CGGCGGGTTG
GAGGAGGATC GTCTCGCCAG CGGAACGGCG GACAGCGACC TCTCCGATCT CTACCTCTCG
CCTGCTTTGC GTACCACGAT TCGTGCTCCG AAGTCGAAGG CCGTCCTGGC GGCGTGA
|
|---|
| Protein sequence | MTVLLREAIG DRLRHARTTK RRTLRDISRA AKVSLGYLSE VERGQKEASS ELLASICEAL
ELPLGELLHN VAADVSALDR VNSGVDPAAE PRPDQARASD TGGARVAEGK EPVSAGSGGL
EEDRLASGTA DSDLSDLYLS PALRTTIRAP KSKAVLAA
|
|---|
| |