| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24520 |
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| Symbol | |
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| ID | 8387776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2642592 |
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| End bp | 2643470 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976492 |
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| Product | predicted xylanase/chitin deacetylase |
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| Protein accession | YP_003134273 |
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| Protein GI | 257056441 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.417407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACCGG ATCCGGAGGA GGTCGGCGCC AACGAACTCG GCCTCGTCCC CGTGCTGATG
TATCACCGGA TCGTTCCCGA GCCCACGTCG GTGTACGACA GGACGCCCGA GGACTTCCGT
GCGGAGCTGC AGCGGCTCGC CGACGAGGAC TACGTCCCCG TCACCACCGC TGAGCTGGCC
TCGGGGGATC TGGACCTCCC CGCGGGAACC CATCCGGTGG TGCTGACGTT CGACGACGGC
GACCCCTCCA CGATCCGCAT GGAGGGTGAC CGGGTGGCGC CGGACACCGC TGTCGGAATC
CTGCTGGACG TGGCGCGGGA GAACCCGGGT TTTCGGCCTA CCGCGAGCGT GTACGTCAAC
GAGGAACCGT TCGGGGGCGG GGAGGCCGGT CGACGGGCGT TGCGGTGGCT CGCCGACAAC
GGTTTCGAAA TCGGCAACCA CACGTACGGC CATACGAACC TCGGCGCAGC GTCACCCGAA
GCCGCGCAGG AGGCCATCGC CATGGGTGAT CGGTTGATCC GCGACGCCGT CGCAGGCTAC
GAGCCCGCCT CACTCGCATT ACCGTTCGGC GCGCGTCCGG ACCCCGGTGA ACTGGCGTTG
TGGGGCGAAG GATACGACTA CAGGGCCGTG CTACTCGTGG GCGCGAATCC CGCCCCGTCA
CCGTTCTCGG CGGAATTCGA CGCGGCCGCC GTACCTCGCA TCCGTTCGCA GGGCCCGGAC
GGCCACGAGG CGGAGTTCGG TTCGACGGCC TGGCTCGACA AGCTCGCGGC CAATCCCGAC
CTGCGCTACA CCTCCGACGG TGATCCCACA CGCATCTCCT ATCCAGCCGG CGACGGATCG
TTGAACCCGG AGTTCGCCGA ATTCGCGGTC CCGTACTGA
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| Protein sequence | MPPDPEEVGA NELGLVPVLM YHRIVPEPTS VYDRTPEDFR AELQRLADED YVPVTTAELA
SGDLDLPAGT HPVVLTFDDG DPSTIRMEGD RVAPDTAVGI LLDVARENPG FRPTASVYVN
EEPFGGGEAG RRALRWLADN GFEIGNHTYG HTNLGAASPE AAQEAIAMGD RLIRDAVAGY
EPASLALPFG ARPDPGELAL WGEGYDYRAV LLVGANPAPS PFSAEFDAAA VPRIRSQGPD
GHEAEFGSTA WLDKLAANPD LRYTSDGDPT RISYPAGDGS LNPEFAEFAV PY
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