Gene Svir_24470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24470 
Symbol 
ID8387771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2637377 
End bp2637802 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content67% 
IMG OID644976487 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_003134268 
Protein GI257056436 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.2751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.418593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCCG TGGTCGCCCG GGTCACCGAG GCTTCGGTCA CCGTGGAAGA CGAGGTCGTC 
GGAGCCATCA CCGAGCCCGG GCTGCTCGTA TTGCTGGGCG TGCACACCGA CGACACACCC
GAACAGGCGG AGACGATGGC CCGCAAGTTG CATGAATTGC GCATTCTGCG GGACGAACAG
TCATGCGCCA CCACGGGGGC ACCACTGCTT GTGGTCAGTC AGTTCACTCT TTACGGTGAC
ACCCGCAAGG GCAGGCGCCC CTCCTGGACG GCGGCGGCGC GTCCCGAACA GGCCGAACCC
CTCGTCGACG CCGTCGTGCA ACGGTTGCGC GACCGCGGCG CCCGGGTGGC CACCGGACGC
TTCGGCGCGA TGATGTCGGT GCACAGCGTC AACGACGGCC CCTTCACCGT CCTGGTGGAA
GTCTGA
 
Protein sequence
MRAVVARVTE ASVTVEDEVV GAITEPGLLV LLGVHTDDTP EQAETMARKL HELRILRDEQ 
SCATTGAPLL VVSQFTLYGD TRKGRRPSWT AAARPEQAEP LVDAVVQRLR DRGARVATGR
FGAMMSVHSV NDGPFTVLVE V