Gene Svir_24010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24010 
Symbol 
ID8387725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2590775 
End bp2591635 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content69% 
IMG OID644976444 
Productmetal-dependent hydrolase 
Protein accessionYP_003134225 
Protein GI257056393 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.078651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACGGA ACACAGCCGT GGCCGCGGTG ATCGTCGCGG CCGTCCTCAC CCTGCTCACC 
GCGATGCTCA CCGTGCCCGG CACGGCCTCG GCGGAGCCGC GTCACGGGCC CCGGGTGCTG
CGTGTCATGA GTTACAACAT CCACACCGGT ATCGGCACCG ACGGGGTGTC GGACCTGGGT
CGGATCGCGT CGGTGATCCG CGACGCGGAC GTGGACGTCG TGGCCTTGCA GGAGGTCGAC
GTGCATTGGG CCGACCGCAG TGATTACGTC GACCAGGCGA CCGAGCTGGC ACGGCTGACG
GACATGTCGG TGTACTTCGC GCCGATCTAC GATCTCGACC CCGAGCCGGG GCGGGAGGAA
CGCCGCCGCT ACGGCGTGGC CGTGTTGAGC CGTCACCCCG TCCTGTCGGC CACCAACCAC
GAGATCAGCC GCTTGTCGAC CGTGGAGCCG GGAGCGGAAC CGGAGCCCAT GCCGGGTTTC
GCGGAGGTCG TCGTCTCGGT ACGCGGCCTG CCGGTGCACG TCTACAACAC ACACCTGGAC
TACCGGCCGG ACCCGACCGT CCGGAGTCGT CAGGTCACGG AGATGCTCGA CATCCTCCGG
CAGGACCCGC CCCGCGCCCA TCAGCTGCTG CTGGGGGACT TCAACGCGGA ACCCGCGGCA
CCGGAGTTGG CGCCGCTGTT CGAACGCCTG CGCGATGCGT GGGGGACACG GGGCGGCGGG
TTGACGTATC CCGCCGAGGA CCCCGTCAAA CGGATCGACT ACATCACCGC GGGTGGCGGT
GTGCGCGTGC TGAACGCCTC CGTCCCCGCT GTCGAGGCCT CCGATCACCG ACCCGTGGTC
GCCACACTCC TCCTGCGGTG A
 
Protein sequence
MSRNTAVAAV IVAAVLTLLT AMLTVPGTAS AEPRHGPRVL RVMSYNIHTG IGTDGVSDLG 
RIASVIRDAD VDVVALQEVD VHWADRSDYV DQATELARLT DMSVYFAPIY DLDPEPGREE
RRRYGVAVLS RHPVLSATNH EISRLSTVEP GAEPEPMPGF AEVVVSVRGL PVHVYNTHLD
YRPDPTVRSR QVTEMLDILR QDPPRAHQLL LGDFNAEPAA PELAPLFERL RDAWGTRGGG
LTYPAEDPVK RIDYITAGGG VRVLNASVPA VEASDHRPVV ATLLLR