Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_23790 |
Symbol | |
ID | 8387703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2571000 |
End bp | 2571857 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644976423 |
Product | hypothetical protein |
Protein accession | YP_003134205 |
Protein GI | 257056373 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000260042 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.333633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACATCT CAGCTGTTCA GCGCATCGAG GACCCGCGGC AAAGGGCCGT GCGCATCAAC GAACTCATCG ACGAGCAGCA GGCTGTGATG TCCGAGTTGA CGCGTTTGCG TCGTGAAGCG ATCGAGGACA TGCAGCGTTC CGGCATCAGC CAGTCGGAGA TCGCCAAGCT GCTCGGCATG ACGAGGTCAC GGGTGTCGCA GATCCTCGCG GGAAGTGGCC GTAAGCCCGA GCGCGCATTG CTCAGCGGAG GCGATTCCGT GACGATCGTT GTCCCCGTGG AGAAGGCGCC CTATCCCGAG GGCAAGGAAC GTCCGGTCGT GCACCACGAA GACACGGAGT TCACCGAACG GATCACCCAA CTAGCGCGTA GCGTGGGCCT GGACGTGGAA ACCGAGTACG CGGGCCAGGG GGACTTCATC GACCTCAACC GCGATGGCCT GGTGATCACG TGCGGTCCAC GGCAGTCACC GTGGCTGGAA CAGGCCTTGA GCGCCGATCA CACGTACGGG TTCGCTCGGG ACGAGGAAGG CTGGTACCTC GAGGACAAGG TAGCGGGCAC GAAGTACCGC TCCCCCGAGG ACGCCGGCGA GCCGCGGGAC TACGGGTATC TCGGCACGCT GCCCAGGCCC GACGGCAACG GGTTCTGGTT GTACGCGGCC GGCATCCACG CCGCGGGTTC ACGAGGTGCG GCGAAGTACC TCGCCGACAA CCTCGCCGCC CTCTACAAGG CGAACAAGAA CACGCTGTGG TCTTGCCTGG TCGCCTGCAC CTTCGACCCG GACACCCGCG AGCTGACCAA GGCCGAGCTC CTCGCCGACG TGCAGCGGCG AGGCGCGATC CCGACAGCAC GCAAGTAG
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Protein sequence | MDISAVQRIE DPRQRAVRIN ELIDEQQAVM SELTRLRREA IEDMQRSGIS QSEIAKLLGM TRSRVSQILA GSGRKPERAL LSGGDSVTIV VPVEKAPYPE GKERPVVHHE DTEFTERITQ LARSVGLDVE TEYAGQGDFI DLNRDGLVIT CGPRQSPWLE QALSADHTYG FARDEEGWYL EDKVAGTKYR SPEDAGEPRD YGYLGTLPRP DGNGFWLYAA GIHAAGSRGA AKYLADNLAA LYKANKNTLW SCLVACTFDP DTRELTKAEL LADVQRRGAI PTARK
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