Gene Svir_23660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_23660 
Symbol 
ID8387690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2558666 
End bp2559487 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content64% 
IMG OID644976415 
Productpredicted hydrolase or acyltransferase of alpha/beta superfamily 
Protein accessionYP_003134197 
Protein GI257056365 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0523777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA TCACCACCGA GGACGGTACG GAGATCTACT ACAAGGATTG GGGCGAGGGC 
CCGGTAGTGA CGTTCTCGCA CGGCTGGCCG CTGAACGCCG ACGCCTGGGA CGGGCAACTG
CTGTTCTTCG CGCAACAGGG CTTCCGCGTC GTCGCGCACG ACCGACGAGG ACACGGTCGG
TCCAGCCAGC CTTCGTCCGG CAACGACATG GACAGCTACG CCGACGACCT CGCGGCCGTC
ATCAACGCCC TCGACCTGCG GGACGTCACC TTGGTCGGCC ATTCCACCGG TGGCGGTGAG
GTGACACGGT ACATCGCCCG TCACGGCAGC GAGCGCGTGG CCAAGGCGGT GCTGATCGCC
GCGGTCCCAC CGATCATGAT CAAGACGTCG GCCAACCCCG AGGGGCTGCC GCGAGAGGTC
TTCGACGACC TACGCTCCCA GCTGGTCAAA GACCGGTCCC AGTTCTACCG GGATCTGGCG
ATCCAGTTCT ACGGTGCCAA CAGATCGGGC AGCGAGGTCT CCCAGGGCAC CCTGGATCAG
TTCTGGTTGT GGGGTATGCA GGTCGGCCTC AAGAACGCCT ACGAGTGCAT CGAGGCGTTC
TCGGAGACCG ACTTCACCGA GGACCTCAAG AAGATCGACG TTCCGACACT CCTCCTGCAC
GGTGAGGACG ACCAGATCGT CCCCATCGAC GACTCCTCCC GTAAAACGGC TCGCCTCGTC
AAGGACGTGA AGGAGATCTA CTACCCCGGT GCACCGCACG GTCTGGCCAA CGCACTCCAG
GATCAGGTCA ACGACGACCT GTTGGCCTTC TTCCGCGGAT AG
 
Protein sequence
MSTITTEDGT EIYYKDWGEG PVVTFSHGWP LNADAWDGQL LFFAQQGFRV VAHDRRGHGR 
SSQPSSGNDM DSYADDLAAV INALDLRDVT LVGHSTGGGE VTRYIARHGS ERVAKAVLIA
AVPPIMIKTS ANPEGLPREV FDDLRSQLVK DRSQFYRDLA IQFYGANRSG SEVSQGTLDQ
FWLWGMQVGL KNAYECIEAF SETDFTEDLK KIDVPTLLLH GEDDQIVPID DSSRKTARLV
KDVKEIYYPG APHGLANALQ DQVNDDLLAF FRG