Gene Svir_23630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_23630 
Symbol 
ID8387687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand+ 
Start bp2556140 
End bp2556772 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content63% 
IMG OID644976413 
Producttranscriptional regulator 
Protein accessionYP_003134195 
Protein GI257056363 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.119387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTC CGAAGCAACC CTTACTGACT CGCGAATCCA TCGTCGCGAC CGCGCTGGAG 
ATTATCGACA CCGATGGCCT CGACGCGCTC AGCACTCCGC GTTTGGCCAA GGAAATGAAC 
GTCACCGCGC CGTCGTTGTA CCACCACTTC CAGGACAAGA ATGAGATCCT CGCGGAAGTG 
GCGCGGGCCA TCTTGCTGGA GATCCCGTTT CCGCGGCGCA AACCCGACTC GGAATGGTCT 
GAACTCTTCG TCCAGCTCAG CCTGAACTTC CGTCGCGCCG TCCTCCGGCA CCGCAACGCG 
GCGCCCATCC TGCTGCAGCA CATGCCCCGC GACGTGCTGA TCAGCGTGTA CGAGCGTATC 
GCCGTGTTCC TTCGCGAAGC CGGCGTACCG CCCCGGCTGC ACGTGCTGAT GCTCGACGGG 
TTGGAGAAGT ACACGCTCGG TACGAGCCTG ACCGAGGCGA TGCACTCCCC GCGGCGCCGT 
ACCAGCATTT TCGGAACCAT AGACCCGGAG GAACAACCGA CCCTCGCCGA AGCCGTCAAA 
GCCAACGAGT GGAACGCCGA ACAACTGTTC GTCCGCACCA TTCGGAGTTT CCTTGCGGGC 
GTCGCTTCCG GCACCGAGAA CGAATCCGAG TAA
 
Protein sequence
MPRPKQPLLT RESIVATALE IIDTDGLDAL STPRLAKEMN VTAPSLYHHF QDKNEILAEV 
ARAILLEIPF PRRKPDSEWS ELFVQLSLNF RRAVLRHRNA APILLQHMPR DVLISVYERI 
AVFLREAGVP PRLHVLMLDG LEKYTLGTSL TEAMHSPRRR TSIFGTIDPE EQPTLAEAVK 
ANEWNAEQLF VRTIRSFLAG VASGTENESE