| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23280 |
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| Symbol | |
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| ID | 8387652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2513265 |
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| End bp | 2514803 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644976381 |
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| Product | hypothetical protein |
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| Protein accession | YP_003134163 |
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| Protein GI | 257056331 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.122242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACAC TCGATCGGCT CATCAACGTC CTGAGTGGTT ACGGGGTCCG CCCGTTGGCG
AGCGTGCCCA CGAGGGACGC CGAGTTGCAC AGTGTCGTCG TCCATGACCC TGCGGAGCCC
ACGGTGTCCG TGGGGGACGC GGTGTTGGCC GTCGGTGTGC GTGACCTGTC CCGCGCGGTC
GGGCTGGCGA TCGCCGCGCA GGCGGTCGTG GTGCTGGTGC ACGACCCCGG GGATTCCGCG
AGCGATGTGC GGGAGGTGGC GACGACAGCC GCCGAACACG GGGTGACGGT GCTGGTCGTG
GATTCCGCGG TGTCGTGGAG TCAGGTGTGC GGCGTGGTCT ACGGCCTGGT GTTGGAAGGC
GGCGAAGCCG AGTCGGGCAG AGGGCCGAGC GATCTGTTCG CACTGGCCGA TGCCATCGCC
TCCACGGTGG AAGGGCAGGT CACCATCGAG GACCGGCTGT CCCGGGTGGT CGCCTATTCG
TCGCTACAGC AGGGAGCGGA CCCGGCACGC CTGGACACCA TCCTGGGCCG ACGGGTGTCG
GAGCCGGTGC GGAAACTGTT CGAGCAACGC GGTGTGTTCC GACATCTGGC CACGTCCGAC
GAGCCGCTGT TCGTGGCACC GTCGCCGGAA CACGGGCTGC GGGGCCGCAT GGTGGCGGGT
GTGCGGGCGG GCCGGGAGTT GCTCGGCTCG GTGTGGGTCA CGTGTGACGA GCCGCTCACC
GGGGCCCGGT TACGGGAGTT GCGGGACGGT GCCGAGGCGG TCGCGTTGCA CCTGCTGCGG
TCGAGGGTGA GCGCCGACCT GGAGCGGCAG GTGGAATCGG AACTCGTCGT CGAGCTGTTG
GACGGCACGC CCGACGCGGC GGCGGTGTGT GGCAAGCTCG GCTTACCACC GGAGACCTTC
CGAGTGGTGG CCCTGCAGGC CCATGCCGAC GACGAGCGAC ACGCGGCCGT GCTGCTCGCC
TACGACCGGG CGACCACGGG ATTCGGGTGG TCCCGGCCCG GCCGCAGCAC GTTGTTCGGC
AACACCGTCT ACACACTGCT GCCCTGCGGG GACGATCCGA CGCCCGCGCG GGACTGGGTG
GACGAACTGG TCCGGGCACT GCCCGCGCAC GTCACGGTCT CGGCGGGTAT CGGAGGTGTG
TGCGAGCTGA GCGAACTTCC CGCTGGGAAA CGAGAGGCGG AGGAGTGCTT GGCCCTGCAC
GTCACCCAAC CCCATCGCGC ACCCGTGGAG TACGACGAGG CGTGGCACGA GATCCTCTTG
CAACGGTTGC GCACGGCCGC GGAGGCCGGC AGACAACCCA CCCGGGGTCC GATCGTGGAA
CTGACCCGGC ACGACGCCGC CCACAACACC CGGTACGTGG CGACGCTCCG GGCGTGGTTG
GAGACGCAAG GTGACCTCGG CGCGGCGGCC GCGACACTCG ACGTGCATCC GAACACCGTC
CGCTACCGCA TGCGTAGGAT CAGCGAGCTG GTGAAGTGGG ACCTCGACGA CCCGAGGACC
CGACTCGCCC TGTTGATCGC GTTGGCCGCG AGCGAATGA
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| Protein sequence | MVTLDRLINV LSGYGVRPLA SVPTRDAELH SVVVHDPAEP TVSVGDAVLA VGVRDLSRAV
GLAIAAQAVV VLVHDPGDSA SDVREVATTA AEHGVTVLVV DSAVSWSQVC GVVYGLVLEG
GEAESGRGPS DLFALADAIA STVEGQVTIE DRLSRVVAYS SLQQGADPAR LDTILGRRVS
EPVRKLFEQR GVFRHLATSD EPLFVAPSPE HGLRGRMVAG VRAGRELLGS VWVTCDEPLT
GARLRELRDG AEAVALHLLR SRVSADLERQ VESELVVELL DGTPDAAAVC GKLGLPPETF
RVVALQAHAD DERHAAVLLA YDRATTGFGW SRPGRSTLFG NTVYTLLPCG DDPTPARDWV
DELVRALPAH VTVSAGIGGV CELSELPAGK REAEECLALH VTQPHRAPVE YDEAWHEILL
QRLRTAAEAG RQPTRGPIVE LTRHDAAHNT RYVATLRAWL ETQGDLGAAA ATLDVHPNTV
RYRMRRISEL VKWDLDDPRT RLALLIALAA SE
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