| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23240 |
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| Symbol | |
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| ID | 8387648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2506769 |
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| End bp | 2508676 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976377 |
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| Product | histidine kinase with GAF domain protein |
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| Protein accession | YP_003134159 |
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| Protein GI | 257056327 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.677284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGCA GTGCCGACAC GGGAGGCGGC CGGCGGGACA CCGCGCGCTC CCGACCCGCT
GTCCGAACAC GGTCCGACCT CGGACTCGAC GAGTCGCTCA CCGGCACACC GGGCCGTCTG
GCGGAGACCC TCACCGCCGG TGACCGGCTG CACTCGTTGT TGAACGCCGT GCTCGCCATC
CACGGAGAGC TGGAACTGGA CTCCACCCTG CGGCGTACCG TGCGCGTCGC ACTGGATCTG
GTGGAGGCCG ACTCCGGGGC CCTCACGATG TTCGACCCGG AGAACGGTTC CCCCGACTCC
GTCGTGGAGG GCCATGACCC CATGTGGCCG TCCCGGACCA CGGCACCCCA GGAGGACGAA
CCCGATCCGA GTACGGAGCT GTCCGTGCCC GTGCGCGTGC GGGACGAGGT GGTCGGCACT
CTCTATGTCA GGGGCAAACG TCGTGGCGGG GACTTCAGTG CCGGCGATCG AGCCGTGTTG
CGCGTGGTGG CGGCGACAGC CGGGGTGGCG GTGGAGAACG CCCGACTGTT CGAACGCGCT
CGAGTTCGGG GCCGGTGGTT GGAGGCCGTC GCCGCTTTGA ACGCGGAACT GCTCGGCGGT
GCCTCCCTGA ATCGGTCGTT GCGGCGTGTC GTCGAGATCG CCAAGGAGCT CTCCGACGCC
GATACCACGC TGCTCCTGCT CACCGAGGCC GATGGGGCGC TGTCCGTGGG CGCGGTGTCC
GACCCGATAC GGCACCTGGA CGAGGGTGCG CTGGTGATCC CGGGTCCCGT CCTCACCGAT
GTGCTGCGCA TGGTCGAGCC GGTCACGTTG GAAGACCTCG GCCGGGAAAC CACTTCGTTG
CCTCCCTCGG TCAGCCGGGA GTTCGGCCCC GCCGTGATCA GCCCCCTCCG AAGCGCGGAG
GGGATGCACG GCCTCCTGGT GGCCCTGCGG AAGAACGGCG CCACGGGATT CACGCGACAG
CAGATCGCGG CGGTGTCCTC GTTCGCCGCG CAGGCCACGT TCGCGCTCCG GTTCGCCGAC
AAGCGGGAGA GCGAGCGGGC GGTCGCCCTG CTGACCGACC GCGACCGGAT CGCCCAGGAT
CTCCACGATC ACGTCATCCA GCGCCTGTTC GCGGCGAGTA TGAGTTTGCA GGGCGCGTTG
AGGCAAACGC ACGACCCGCG CACCGCCGAG CGCATCGGTG ATGCGATGCG GAGGTTGGAT
CTGACCGTCA AGGAGATCCG CACCTCGATC TTCGAACTGC ACTCGGTGGG GACGGGGAAG
AACAGCCTGC GGCGGAGGTT GCTCGACGCC GTACCGGTAC TGCCCCAAGG GTTTCCGACG
CTGTCGGTGC GCATCGGGGG AGCCGTGGAC ACGTTCGTGC CCGAGTCGTT GGGGCGCGAC
ATGGAGGTCG TCGTCCGGGA AGCGGTCCGG CGACTCGTGC GACAGGCGCA GGACGACGGC
ACCGCCGCGG AGATCACGCT CGATGTCGAG GTCGACGACG CGGTCAGGAT CGACATCACC
GTGGCGGGTC CGATCTCGGT TCCGGCGGAC TCACGGTGGC TCGAGCAATT GCGCCGCCGA
AGCCGTGATC ACGGCGGGAA GACGGTCGTC GACGACCACG GCGGCACGGT GCGGTTGCTC
TGGACGGCAC CGTTGCCGAC CTCGGACGCC GCACCACCGC GACGTGGTGG TGCGAGTGAA
CGGGCGAGGG CACCTCTTTC GGAAGAGGTG ACTTCCGACC CTGCACACAA CAGGTGCGGG
CTGACATGCT GTCCACCGAT CCTCGGGGGA GGACACCACC ATGACCACAG CGGATTCCGA
GAGCCTTGCG GAGCGGGTGG CGCAACAGCT GGCGGCGGTG GTCATCGCCG CGCTCCGGCC
GGATACGACG TCACCCGATG CGGGGCCCGA TCCCGAATTG ATCGGTGA
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| Protein sequence | MSSSADTGGG RRDTARSRPA VRTRSDLGLD ESLTGTPGRL AETLTAGDRL HSLLNAVLAI
HGELELDSTL RRTVRVALDL VEADSGALTM FDPENGSPDS VVEGHDPMWP SRTTAPQEDE
PDPSTELSVP VRVRDEVVGT LYVRGKRRGG DFSAGDRAVL RVVAATAGVA VENARLFERA
RVRGRWLEAV AALNAELLGG ASLNRSLRRV VEIAKELSDA DTTLLLLTEA DGALSVGAVS
DPIRHLDEGA LVIPGPVLTD VLRMVEPVTL EDLGRETTSL PPSVSREFGP AVISPLRSAE
GMHGLLVALR KNGATGFTRQ QIAAVSSFAA QATFALRFAD KRESERAVAL LTDRDRIAQD
LHDHVIQRLF AASMSLQGAL RQTHDPRTAE RIGDAMRRLD LTVKEIRTSI FELHSVGTGK
NSLRRRLLDA VPVLPQGFPT LSVRIGGAVD TFVPESLGRD MEVVVREAVR RLVRQAQDDG
TAAEITLDVE VDDAVRIDIT VAGPISVPAD SRWLEQLRRR SRDHGGKTVV DDHGGTVRLL
WTAPLPTSDA APPRRGGASE RARAPLSEEV TSDPAHNRCG LTCCPPILGG GHHHDHSGFR
EPCGAGGATA GGGGHRRAPA GYDVTRCGAR SRIDR
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